Escherichia coli G12 |
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Putative Escherichia coli G12 RM systems
Ref: Cui,J. and Yuan,L. unpublished
REBASE ref # 37117
| Sequence length: | GenBank #: | |
| Chromosome: | 4,987,142 bp | CP129272 |
| plasmid pG12b: | 93,635 bp | CP129274 |
REBASE acronym: EcoG12a
Org_num: 68953
All begin QYN12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21250 | restriction endonuclease | |||
| 21255 | M | M.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | M.EcoG12aORF21255P |
| 21260 | S | S.Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | S.EcoG12aORF21255P |
| 21265 | R | Ecos641ORF3050P (100% identity) | GATANNNNNNTAG | EcoG12aORF21255P |
| 21270 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2170 | cell division protein DamX | |||
| 2175 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoG12aDamP |
| 2180 | ribulose-phosphate 3-epimerase | |||
| 2770 | DUF2556 family protein | |||
| 2775 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoG12aORF2775P |
| 2780 | DNA-binding transcriptional regulator Fis | |||
| 6015 | 28 aa hypothetical protein | |||
| 6020 | M | M.Sen24770ORF310P (100% identity) | GATC | M.EcoG12aORF6020P |
| 6025 | RusA family crossover junction | |||
| 6055 | 95 aa hypothetical protein | |||
| 6060 | M | M.EcoU013ORF19155P (99% identity) | M.EcoG12aORF6060P | |
| 6065 | phage holin, lambda family | |||
| 9845 | phosphohydrolase | |||
| 9850 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoG12aDcmP |
| 9855 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoG12aDcmP |
| 9860 | drug/metabolite exporter YedA | |||
| 16515 | NinE family protein | |||
| 16520 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoG12aORF16520P |
| 16525 | recombination protein NinB | |||
| 19200 | LexA family transcriptional regulator | |||
| 19205 | M | M.EcoS133I (100% identity) | GATC | M.EcoG12aORF19205P |
| 19210 | PerC family transcriptional regulator | |||
| 21020 | LexA family transcriptional regulator | |||
| 21025 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoG12aORF21025P |
| 21030 | PerC family transcriptional regulator | |||
| plasmid pG12b | ||||
| 25900 | 97 aa hypothetical protein | |||
| 25905 | M | M.Xca80ORFEP (100% identity) | M.EcoG12aORF25905P | |
| 25910 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21245 | BrnT family toxin | |||
| 21250 | R | EfeE4C07MrrP (100% identity) | EcoG12aMrrP | |
| 21255 | class I SAM-dependent DNA methyltransferase | |||