Pectobacterium aroidearum YKX |
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Putative Pectobacterium aroidearum YKX RM systems
Ref: Zhang,Y. unpublished
REBASE ref # 23609
Complete sequence: 4,930,000 bp
GenBank #: CP129239
REBASE acronym: ParYKX
Org_num: 69236
All begin QX495_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1975 | LPS export ABC transporter permease LptG | |||
| 1985 | M | M.ParQJ311ORF2065P (99% identity) | M.ParYKXORF1985P | |
| 1990 | S | S.RorFF15ORF23995P (86% identity) | S.ParYKXORF1985P | |
| 1995 | R | ParLJ2ORFAP (99% identity) | ParYKXORF1985P | |
| 2000 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3310 | helix-turn-helix transcriptional regulator | |||
| 3315 | R | EcoXH990ORF7415P (93% identity) | ParYKXORF3315P | |
| 3320 | cupin domain-containing protein | |||
| 7440 | 92 aa hypothetical protein | |||
| 7445 | M | M.DdaM23ORF8515P (89% identity) | M.ParYKXORF7445P | |
| 7450 | 921 aa hypothetical protein | |||
| 13605 | tyrosine-type recombinase/integrase | |||
| 13610 | M | M.Kva35921ORFDP (70% identity) | M.ParYKXORF13610P | |
| 13615 | 337 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1995 | DEAD/DEAH box helicase family protein | |||
| 2000 | R | ParQJ311McrBP (100% identity) | ParYKXMcrBP | |
| 2005 | R | ParLJ2McrCP (99% identity) | ParYKXMcrCP | |
| 2010 | AAA domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5920 | DUF2732 family protein | |||
| 5925 | M | M.Pca1033ORF5625P (99% identity) | M.ParYKXORF5925P | |
| 5930 | ASCH domain-containing protein | |||