Klebsiella pneumoniae YZE1-3D |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae YZE1-3D RM systems
Ref: Wang,Q. and Li,R. unpublished
REBASE ref # 31779
| Sequence length: | GenBank #: | |
| Chromosome: | 5,286,700 bp | CP129186 |
| plasmid pYZE1-3D-2: | 135,702 bp | CP129187 |
| plasmid pYZE1-3D-3: | 64,447 bp | CP129189 |
| plasmid pYZE1-3D_tmex: | 207,983 bp | CP129185 |
REBASE acronym: KpnD
Org_num: 69135
All begin QTN19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYZE1-3D-2 | ||||
| 27495 | DUF262 domain-containing protein | |||
| 27500 | M | M.Kpnstrakp1ORF29330P (100% identity) | CACNNNNNRTAT | M.KpnDORF27500P |
| 27505 | S | S.Kpnstrakp1ORF29330P (100% identity) | CACNNNNNRTAT | S.KpnDORF27500P |
| 27510 | R | Kpn4656ORF30755P (99% identity) | CACNNNNNRTAT | KpnDORF27500P |
| 27515 | 71 aa hypothetical protein | |||
| plasmid pYZE1-3D_tmex | ||||
| 175 | DUF262 domain-containing protein | |||
| 180 | M | M.KvaX39ORF28705P (100% identity) | GAGNNNNNNTAYG | M.KpnDORF180P |
| 185 | S | S.KpnTC101ORF27560P (100% identity) | GAGNNNNNNTAYG | S.KpnDORF180P |
| 190 | R | KpnTC101ORF27560P (100% identity) | GAGNNNNNNTAYG | KpnDORF180P |
| 195 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2835 | cell division protein DamX | |||
| 2840 | M | M.KspC31DamP (100% identity) | GATC | M.KpnDDamP |
| 2845 | ribulose-phosphate 3-epimerase | |||
| 9890 | phosphohydrolase | |||
| 9895 | M | M.Kpn2CDcmP (100% identity) | CCWGG | M.KpnDDcmP |
| 9900 | V | V.Kpn2CDcmP (100% identity) | V.KpnDDcmP | |
| 9905 | drug/metabolite exporter YedA | |||
| 16005 | YqaJ viral recombinase family protein | |||
| 16010 | M | M.Kpnu28ORF20920P (100% identity) | GATC | M.KpnDORF16010P |
| 16015 | 73 aa hypothetical protein | |||
| 23775 | HNH endonuclease | |||
| 23780 | R | Ksp4251ORF21915P (100% identity) | KpnDORF23780P | |
| 23785 | type VI secretion system tube protein Hcp | |||
| plasmid pYZE1-3D-2 | ||||
| 27545 | 77 aa hypothetical protein | |||
| 27550 | M | M.Kpnstrakp1ORF29390P (100% identity) | GATC | M.KpnDORF27550P |
| 27555 | 277 aa hypothetical protein | |||
| plasmid pYZE1-3D-3 | ||||
| 27780 | EAL domain-containing protein | |||
| 27785 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnDORF27790P |
| 27790 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnDORF27790P |
| 27795 | IS1 family transposase | |||