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Putative Pectobacteriaceae bacterium LS101 RM systems
Ref: Brochier-Armanet,C. et al. unpublished
REBASE ref # 37175
Complete sequence: 4,918,023 bp
GenBank #: CP128857
REBASE acronym: Pba1
Org_num: 69235
All begin PCO85_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5680 | site-specific integrase | |||
5685 | S | S2.Pba111ORF5720P (100% identity) | S2.Pba1ORF5710P | |
5690 | R | Pba111ORF5720P (100% identity) | Pba1ORF5710P | |
5695 | macro domain-containing protein | |||
5700 | DUF4433 domain-containing protein | |||
5705 | S | S1.Pba111ORF5720P (100% identity) | S1.Pba1ORF5710P | |
5710 | M | M.Pba111ORF5720P (100% identity) | M.Pba1ORF5710P | |
5715 | transcription factor | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1870 | SPOR domain-containing protein | |||
1875 | M | M.Ssp39006DamP (100% identity) | M.Pba1DamP | |
1880 | ribulose-phosphate 3-epimerase | |||
3075 | DinI family protein | |||
3080 | M | M.Pba111ORF3090P (100% identity) | M.Pba1ORF3080P | |
3085 | R | Pba111ORF3090P (100% identity) | Pba1ORF3080P | |
3090 | DUF262 domain-containing protein | |||
17240 | Dam family site-specific | |||
17245 | M | M.Pba111ORF17225P (100% identity) | M.Pba1ORF17245P | |
17250 | replication endonuclease | |||
17265 | Tum protein | |||
17270 | M | M.Pba111ORF17250P (100% identity) | M.Pba1ORF17270P | |
17275 | R | Pba111ORF17250P (100% identity) | Pba1ORF17270P | |
17280 | DUF262 domain-containing protein | |||
21100 | DNA-binding transcriptional regulator | |||
21105 | M | M.Pba111ORF21080P (100% identity) | M.Pba1ORF21105P | |
21110 | 317 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3665 | IS3 family transposase | |||
3670 | R | Pba111MrrP (100% identity) | Pba1MrrP | |
3675 | HD domain-containing protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
3050 | DUF3850 domain-containing protein | |||
3055 | M | M.Pba111ORF3065P (100% identity) | M.Pba1ORF3055P | |
3060 | replication endonuclease | |||
17235 | 3-5 exonuclease | |||
17240 | M | M.Pba111ORF17220P (100% identity) | M.Pba1ORF17240P | |
17245 | DNA cytosine methyltransferase |