Clostridium perfringens ATCC 13124 |
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Putative Clostridium perfringens ATCC 13124 RM systems
Ref: Myers,G.S. et al. Genome Res. 16 (8), 1031-1040 (2006)
REBASE ref # 9580
Complete sequence: 3,256,683 bp
GenBank #: CP000246 (NC_008261)
REBASE acronym: CpeA
Org_num: 4467
All begin CPF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2595 | 238 aa conserved hypothetical protein | |||
| 2596 | R | Cpe3842ORF14030P (98% identity) | CACNNNNNRTAAA | CpeAIP |
| 2597 | 362 aa conserved hypothetical protein | |||
| 2598 | S | S.CpeHS10ORF12990P (62% identity) | CACNNNNNRTAAA | S.CpeAI |
| 2599 | M | M.Cpe65ORF3070P (98% identity) | CACNNNNNRTAAA | M.CpeAI |
| 2600 | 357 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 138 | site-specific recombinase, resolvase family | |||
| 139 | M | M.Cpe87880ORFBP (86% identity) | GGWCC | M.CpeAII |
| 140 | R | Cpe87880ORFBP (84% identity) | GGWCC | CpeAIIP |
| 141 | 104 aa conserved hypothetical protein | |||
| 1015 | 221 aa hypothetical protein | |||
| 1016 | R | Cpe001ORF9800P (99% identity) | GATC | CpeAIIIP |
| 1017 | M | M.CpeTS1ORF18330P (99% identity) | GATC | M.CpeAIII |
| 1018 | DNA-cytosine methyltransferase | |||
| 1017 | DNA-cytosine methyltransferase | |||
| 1018 | M | M.CboB1ORF2548P (76% identity) | CCGG | M.CpeAIV |
| 1019 | 160 aa hypothetical protein | |||
| 1605 | 529 aa conserved hypothetical protein | |||
| 1606 | M | M.Cbocb5ORF17920P (59% identity) | GGCC | M.CpeAVII |
| 1607 | 165 aa conserved hypothetical protein | |||
| 2913 | methionine-S-sulfoxide reductase | |||
| 2914 | M | M.Cpe21D5ORFAP (100% identity) | GTATAC | M.CpeAVI |
| 2915 | phage infection protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 360 | 108 aa hypothetical protein | |||
| 361 | M | M.CpeDDORF1955P (97% identity) | VGACAT | M.CpeAV |
| 362 | R | Cpe4969ORF411P (96% identity) | VGACAT | CpeAVP |
| 363 | 183 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 991 | membrane protein | |||
| 992 | R | CpeDDMcrBP (99% identity) | CpeAMcrBP | |
| 993 | R | CpeDDMcrCP (99% identity) | CpeAMcrCP | |
| 994 | membrane protein | |||