Escherichia coli VG888-46E9 |
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Putative Escherichia coli VG888-46E9 RM systems
Ref: Perreten,V. et al. unpublished
REBASE ref # 37120
| Sequence length: | GenBank #: | |
| Chromosome: | 4,821,480 bp | CP128581 |
| plasmid p888-46E9a: | 134,619 bp | CP128580 |
REBASE acronym: Eco6E9
Org_num: 69013
All begin QUS00_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2635 | 104 aa hypothetical protein | |||
| 2640 | M | M.EcoNIH4ORF28685P (100% identity) | M.Eco6E9ORF2640P | |
| 2645 | 73 aa hypothetical protein | |||
| 3065 | cell division protein DamX | |||
| 3070 | M | M.SspPIBDamP (99% identity) | GATC | M.Eco6E9DamP |
| 3075 | ribulose-phosphate 3-epimerase | |||
| 3710 | DUF2556 family protein | |||
| 3715 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco6E9ORF3715P |
| 3720 | DNA-binding transcriptional regulator Fis | |||
| 6665 | TraR/DksA family transcriptional regulator | |||
| 6670 | M | M.Sen24760ORF10410P (100% identity) | GATC | M.Eco6E9ORF6670P |
| 6675 | replication endonuclease | |||
| 10625 | phosphohydrolase | |||
| 10630 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco6E9DcmP |
| 10635 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Eco6E9DcmP |
| 10640 | drug/metabolite exporter YedA | |||
| 12765 | DUF977 family protein | |||
| 12770 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco6E9ORF12770P | |
| 12775 | 139 aa hypothetical protein | |||
| 16565 | replication endonuclease | |||
| 16570 | M | M.Eco1C23ORF7440P (99% identity) | GATC | M.Eco6E9ORF16570P |
| 16575 | TraR/DksA family transcriptional regulator | |||
| 22330 | 190 aa hypothetical protein | |||
| 22335 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Eco6E9ORF22340P |
| 22340 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Eco6E9ORF22340P |
| 22345 | acetyltransferase | |||
| 23140 | phage holin, lambda family | |||
| 23145 | M | M.EcoP61ORF17815P (99% identity) | M.Eco6E9ORF23145P | |
| 23150 | 67 aa hypothetical protein | |||
| plasmid p888-46E9a | ||||
| 920 | 73 aa hypothetical protein | |||
| 925 | M | M.Sen1045ORF24220P (100% identity) | M.Eco6E9ORF925P | |
| 930 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10945 | ATP-dependent DNA helicase | |||
| 10950 | M | M.EcoLR41ORF11540P (100% identity) | M.Eco6E9ORF10950P | |
| 10955 | R | EcoLR41ORF11540P (99% identity) | Eco6E9ORF10950P | |
| 10960 | UPF0149 family protein YecA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21180 | 39 aa hypothetical protein | |||
| 21185 | R | SflLIN8GmrSDP (42% identity) | Eco6E9GmrSDP | |
| 21190 | cytoplasmic protein | |||