Escherichia coli O2:K1:H5 |
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Putative Escherichia coli O2:K1:H5 RM systems
Ref: Ha,E.-J. unpublished
REBASE ref # 37057
Complete sequence: 5,311,009 bp
GenBank #: CP126926
REBASE acronym: Eco19035
Org_num: 68960
All begin QQA32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | tape measure protein | |||
| 3635 | R | Eco1540ORF23930P (100% identity) | Eco19035ORF3645P | |
| 3640 | S | S.EcoPD4ORF23395P (68% identity) | S1.Eco19035ORF3645P | |
| 3645 | M | M.EcoW1316ORF930P (99% identity) | M.Eco19035ORF3645P | |
| 3650 | GTPase family protein | |||
| 21555 | adenine/cytosine-specific restriction | |||
| 21560 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco19035ORF21565P |
| 21565 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco19035ORF21565P |
| 21570 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco19035ORF21565P |
| 21575 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1965 | cell division protein DamX | |||
| 1970 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco19035DamP |
| 1975 | ribulose-phosphate 3-epimerase | |||
| 2565 | DUF2556 family protein | |||
| 2570 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco19035ORF2570P |
| 2575 | DNA-binding transcriptional regulator Fis | |||
| 6450 | PerC family transcriptional regulator | |||
| 6455 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco19035ORF6455P |
| 6460 | LexA family transcriptional regulator | |||
| 7290 | DUF1382 family protein | |||
| 7295 | M | M.EcoX675ORF14745P (100% identity) | M.Eco19035ORF7295P | |
| 7300 | DGQHR domain-containing protein | |||
| 10915 | phosphohydrolase | |||
| 10920 | M | M.EcoF18DcmP (100% identity) | CCWGG | M.Eco19035DcmP |
| 10925 | V | V.EcoF18DcmP (100% identity) | V.Eco19035DcmP | |
| 10930 | drug/metabolite exporter YedA | |||
| 11500 | TrmB family transcriptional regulator | |||
| 11505 | M | M.EcoC311ORF6085P (100% identity) | M.Eco19035ORF11505P | |
| 11515 | tellurite/colicin resistance protein | |||
| 14525 | 39 aa hypothetical protein | |||
| 14545 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco19035ORF14545P |
| 14550 | TrmB family transcriptional regulator | |||
| 21805 | HNH endonuclease | |||
| 21810 | R | Ecoi127aORF4076P (100% identity) | Eco19035ORF21810P | |
| 21815 | peptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22840 | IS3 family transposase | |||
| 22845 | M | M.SenH18ORF28191P (99% identity) | CRACAG | M.Eco19035ORF22845P |
| 22850 | R | EcoUM1886ORF4740P (99% identity) | CRACAG | Eco19035ORF22845P |
| 22855 | DUF1281 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6650 | recombinase family protein | |||
| 6655 | R | EspFAAGmrSDP (100% identity) | Eco19035GmrSDP | |
| 6660 | DinI-like family protein | |||
| 21550 | GTPase | |||
| 21555 | R | EcosS1MrrP (100% identity) | Eco19035MrrP | |
| 21560 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15440 | NinE family protein | |||
| 15445 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco19035ORF15445P |
| 15450 | recombination protein NinB | |||