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Putative Paralcaligenes species CC-YST667 RM systems
Ref: Lin,S.-Y. and Young,C.-C. unpublished
REBASE ref # 37027
Complete sequence: 3,284,569 bp
GenBank #: CP128233
REBASE acronym: Psp7
Org_num: 69229
All begin N7E01_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
300 | 106 aa hypothetical protein | |||
??? | R | Bps5569ORF2776P (79% identity) | Psp7ORF320P | |
??? | S | S.CaqCJGORF1885P (24% identity) | S2.Psp7ORF320P | |
315 | S | S.CaqCJGORF1885P (28% identity) | S1.Psp7ORF320P | |
320 | M | M.Sni3406ORF19975P (43% identity) | M.Psp7ORF320P | |
325 | 145 aa hypothetical protein | |||
1970 | IS3 family transposase | |||
1975 | R | Gin17901ORFBP (95% identity) | Psp7ORF1985P | |
1980 | S | S.TspMZORF4P (58% identity) | S.Psp7ORF1985P | |
??? | M | M.Gin17901ORFBP (90% identity) | M.Psp7ORF1985P | |
1995 | phage integrase SAM-like domain-containing | |||
4060 | ATP-binding protein | |||
4065 | M | M.Bav119ORF1850P (89% identity) | M.Psp7ORF4065P | |
4070 | IS3 family transposase | |||
4075 | IS5 family transposase | |||
4080 | S | S.Asp19m6ORF1984P (19% identity) | S1.Psp7ORF4065P | |
4085 | S | S.Tve301ORF6060P (19% identity) | S2.Psp7ORF4065P | |
4090 | R | Bav119ORF1850P (44% identity) | Psp7ORF4065AP | |
4095 | R | AfaJQ135ORF2155P (40% identity) | Psp7ORF4065BP | |
4100 | 44 aa hypothetical protein | |||
4105 | DNA binding domain-containing protein | |||
4110 | ATP-binding protein | |||
4115 | S | S2.Ple082ORFFP (55% identity) | S3.Psp7ORF4065P | |
4120 | 126 aa hypothetical protein | |||
15370 | helix-turn-helix transcriptional regulator | |||
15375 | R | AfaP156ORF2364P (90% identity) | Psp7ORF15390P | |
15380 | S | S.Bhu16318ORFAP (14% identity) | S.Psp7ORF15390P | |
15385 | 57 aa hypothetical protein | |||
15390 | M | M.AfaP156ORF2364P (60% identity) | M.Psp7ORF15390P | |
15395 | TnsA endonuclease N-terminal domain-containing | |||
16100 | ankyrin repeat domain-containing protein | |||
16105 | M | M.AfaMUB14ORF13105P (91% identity) | M.Psp7ORF16105P | |
16110 | S | S2.Aca2508ORF6015P (74% identity) | S1.Psp7ORF16105P | |
16115 | S | S.KgyCG1ORF10115P (40% identity) | S2.Psp7ORF16105P | |
16120 | S | S.AspI09ORF12200P (22% identity) | S3.Psp7ORF16105P | |
16125 | DNA binding domain-containing protein | |||
16130 | R | PflBS2ORFCP (86% identity) | Psp7ORF16105P | |
16135 | winged helix-turn-helix domain-containing | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2220 | DUF1376 domain-containing protein | |||
2225 | M | M.Psp7ORF15910P (98% identity) | M.Psp7ORF2225P | |
2230 | 69 aa hypothetical protein | |||
2335 | 128 aa hypothetical protein | |||
2340 | M | M.RsoF501ORFAP (54% identity) | M.Psp7ORF2340P | |
2345 | 101 aa hypothetical protein | |||
15905 | 69 aa hypothetical protein | |||
15910 | M | M.Psp7ORF2225P (98% identity) | M.Psp7ORF15910P | |
15915 | DUF1376 domain-containing protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5170 | transcriptional regulator | |||
5175 | R | Pspye3ORF11610P (7% identity) | R1.Psp7ORF5185P | |
5180 | R | Pspye3ORF11610P (90% identity) | R2.Psp7ORF5185P | |
??? | M | M.Pspye3ORF11610P (99% identity) | M.Psp7ORF5185P | |
5195 | recombinase family protein |