Klebsiella pneumoniae KPN_SINK_001 |
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Putative Klebsiella pneumoniae KPN_SINK_001 RM systems
Ref: Hanage,W.P. and Regev-Yochay,G. unpublished
REBASE ref # 37011
| Sequence length: | GenBank #: | |
| Chromosome: | 5,456,289 bp | CP106890 |
| plasmid unnamed1: | 209,198 bp | CP106891 |
| plasmid unnamed2: | 89,653 bp | CP106892 |
REBASE acronym: KpnNK001
Org_num: 68438
All begin N6138_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 28315 | Tn3-like element IS3000 family transposase | |||
| 28320 | M | M.Kpni147adORF4939P (100% identity) | M.KpnNK001ORF28320P | |
| 28325 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.KspC31DamP (100% identity) | GATC | M.KpnNK001DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 3375 | DinI family protein | |||
| 3380 | M | M.KpnP0018ORF3505P (100% identity) | GTCGAC | M.KpnNK001ORF3380P |
| 3385 | R | Kpn01ORF3380P (100% identity) | GTCGAC | KpnNK001ORF3380P |
| 3390 | phage portal protein | |||
| 6955 | 63 aa hypothetical protein | |||
| 6960 | M | M.Kpn01ORF6960P (100% identity) | M.KpnNK001ORF6960P | |
| 6965 | MmcB family DNA repair protein | |||
| 9725 | phosphohydrolase | |||
| 9730 | M | M.Kpnst69DcmP (100% identity) | CCWGG | M.KpnNK001DcmP |
| 9735 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnNK001DcmP |
| 9740 | drug/metabolite exporter YedA | |||
| 20555 | DUF1317 domain-containing protein | |||
| 20560 | M | M.Kpss50ORF20150P (100% identity) | GATC | M.KpnNK001ORF20560P |
| 20565 | dcm methylase | |||
| 23885 | HNH endonuclease | |||
| 23890 | R | KpnvKP9ORFAP (100% identity) | KpnNK001ORF23890P | |
| 23895 | type VI secretion system tube protein Hcp | |||
| plasmid unnamed1 | ||||
| 27930 | 109 aa hypothetical protein | |||
| 27935 | M | M.Ksp6FORF29980P (100% identity) | CCWGG | M.KpnNK001ORF27935P |
| 27940 | R | Ksp6FORF29980P (100% identity) | CCWGG | KpnNK001ORF27935P |
| 27945 | 82 aa hypothetical protein | |||
| 28020 | 81 aa hypothetical protein | |||
| 28025 | M | M.KquBL06ORF12610P (100% identity) | M.KpnNK001ORF28025P | |
| 28030 | 1126 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 28380 | IS1 family transposase | |||
| 28385 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnNK001ORF28385P |
| 28390 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnNK001ORF28385P |
| 28395 | EAL domain-containing protein | |||