Escherichia coli C25 |
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Putative Escherichia coli C25 RM systems
Ref: Mihailovskaya,V. et al. unpublished
REBASE ref # 36976
Complete sequence: 5,214,323 bp
GenBank #: CP127314
REBASE acronym: EcosC25
Org_num: 68353
All begin QRM69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23010 | restriction endonuclease | |||
| 23015 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcosC25ORF23015P |
| 23020 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcosC25ORF23015P |
| 23025 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcosC25ORF23015P |
| 23030 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3480 | cell division protein DamX | |||
| 3485 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosC25DamP |
| 3490 | ribulose-phosphate 3-epimerase | |||
| 4080 | DUF2556 family protein | |||
| 4085 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcosC25ORF4085P |
| 4090 | DNA-binding transcriptional regulator Fis | |||
| 11770 | phosphohydrolase | |||
| 11775 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcosC25DcmP |
| 11780 | V | V.Ecos9DcmP (100% identity) | CCWGG | V.EcosC25DcmP |
| 11785 | drug/metabolite exporter YedA | |||
| 23365 | McrC family protein | |||
| 23370 | R | EcosS9ORF2810P (99% identity) | GGTCTC | EcosC25ORF23375P |
| 23375 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcosC25ORF23375P |
| 23380 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcosC25ORF23375P |
| 23385 | helix-turn-helix domain-containing protein | |||
| 24980 | class II holin family protein | |||
| 24985 | M | M.Sso63633ORF22290P (100% identity) | M.EcosC25ORF24985P | |
| 24990 | 67 aa hypothetical protein | |||
| 25020 | LexA family transcriptional regulator | |||
| 25025 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcosC25ORF25025P |
| 25030 | 28 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23005 | BrnT family toxin | |||
| 23010 | R | Ecou021MrrP (100% identity) | EcosC25MrrP | |
| 23015 | class I SAM-dependent DNA methyltransferase | |||
| 23355 | glycosyltransferase | |||
| 23360 | R | EcosS3McrBP (100% identity) | EcosC25McrBP | |
| 23365 | R | EcosS9McrCP (100% identity) | EcosC25McrCP | |
| 23370 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16300 | NinE family protein | |||
| 16305 | M | M.Ecos9ORF15450P (100% identity) | GATC | M.EcosC25ORF16305P |
| 16310 | recombination protein NinB | |||