Pseudomonas aeruginosa 3541 |
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Putative Pseudomonas aeruginosa 3541 RM systems
Ref: Ivanov,I. et al. unpublished
REBASE ref # 36964
| Sequence length: | GenBank #: | |
| chromosome 3541: | 6,862,412 bp | OX638610 |
| plasmid p3541_1: | 179,283 bp | OX638611 |
REBASE acronym: Pae3541
Org_num: 68169
All begin JCHGIK_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 3541 | ||||
| 12845 | HTH-8 domain-containing protein | |||
| 12850 | R | PaeP23aORF23490P (100% identity) | CYYANNNNNNCTGC | Pae3541ORF12860P |
| 12855 | DNA recombination protein RmuC | |||
| 12860 | M | M.Pfl10783I (100% identity) | CYYANNNNNNCTGC | M.Pae3541ORF12860P |
| 12865 | S | S.Pfl10783I (100% identity) | CYYANNNNNNCTGC | S.Pae3541ORF12860P |
| 12870 | ATP-dependent endonuclease of the OLD | |||
| 24275 | Helicase-C-3 domain-containing protein | |||
| 24280 | S | S.PaeTJM4ORFDP (100% identity) | TRGANNNNNNTGC | S.Pae3541ORF24285P |
| 24285 | M | M.PaeWC55ORF6515P (100% identity) | TRGANNNNNNTGC | M.Pae3541ORF24285P |
| 24290 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 3541 | ||||
| 13810 | ATP-binding protein | |||
| 13815 | M | M.PaestS1ORF21380P (100% identity) | M.Pae3541ORF13815P | |
| 13820 | Thioredoxin-like-fold domain-containing protein | |||
| 31630 | ATP-binding protein | |||
| 31635 | M | M.PaePA57ORF4740P (100% identity) | M.Pae3541ORF31635P | |
| 31640 | HsdR | |||
| plasmid p3541_1 | ||||
| 135 | 68 aa hypothetical protein | |||
| 140 | M | M.PaePALA54ORF6319P (100% identity) | M.Pae3541ORF140P | |
| 145 | Conserved secreted protein | |||
| 920 | DSHCT domain-containing protein | |||
| 925 | M | M.PaePD2aORF12020P (100% identity) | M.Pae3541ORF925P | |
| 930 | DUF3348 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 3541 | ||||
| 11855 | DUF4391 domain-containing protein | |||
| 11860 | M | M.Ppu495ORF21255P (100% identity) | M.Pae3541ORF11860P | |
| 11865 | R | PaeIMP13ORF6970P (100% identity) | Pae3541ORF11860P | |
| 11870 | ATP-dependent OLD family endonuclease | |||