Trueperella bernardiae UMB8254 |
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Putative Trueperella bernardiae UMB8254 RM systems
Ref: Choi,B. unpublished
REBASE ref # 36898
Complete sequence: 2,103,060 bp
GenBank #: CP127099
REBASE acronym: Tbe8254
Org_num: 68304
All begin QPC17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 855 | G5 domain-containing protein | |||
| 860 | M | M.Tbe504ORF1455P (95% identity) | M.Tbe8254ORF860P | |
| 865 | S | S1.PmeBin205ORFCP (64% identity) | S1.Tbe8254ORF860P | |
| 870 | S | S2.Bbi3115ORF705P (28% identity) | S2.Tbe8254ORF860P | |
| 875 | R | Tbe504ORF1455P (99% identity) | Tbe8254ORF860P | |
| 880 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 185 | 494 aa hypothetical protein | |||
| 190 | M | M.Tpy67ORF4575P (91% identity) | M.Tbe8254ORF190P | |
| 195 | DUF4913 domain-containing protein | |||
| 6035 | methionine adenosyltransferase | |||
| 6040 | M | M.WneVSI01ORF9340P (98% identity) | M.Tbe8254ORF6040P | |
| 6045 | DNA cytosine methyltransferase | |||
| 6040 | site-specific DNA-methyltransferase | |||
| 6045 | M | M.Wne0125ORF9320P (90% identity) | M.Tbe8254ORF6045P | |
| 6050 | cell division protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5915 | DUF1837 domain-containing protein | |||
| 5920 | R | Gho859ORF6430P (100% identity) | Tbe8254ORF5925P | |
| 5925 | M | M.Gho859ORF6430P (100% identity) | M.Tbe8254ORF5925P | |
| 5930 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2425 | DUF4352 domain-containing protein | |||
| 2430 | R | Tsp307ORF6910P (83% identity) | Tbe8254ORF2430P | |
| 2435 | malate dehydrogenase | |||