Varibaculum cambriense UMB0796 |
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Putative Varibaculum cambriense UMB0796 RM systems
Ref: Choi,B. unpublished
REBASE ref # 36898
Complete sequence: 2,319,563 bp
GenBank #: CP126959
REBASE acronym: Vca796
Org_num: 68305
All begin CYK25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5765 | 334 aa hypothetical protein | |||
| 5770 | R | Cre11140IP (92% identity) | Vca796ORF5780P | |
| 5775 | S | S.Cre11140I (56% identity) | S.Vca796ORF5780P | |
| 5780 | M | M.Cre11142ORF1891P (56% identity) | M.Vca796ORF5780BP | |
| 5785 | M | M.Cre45100ORF1531P (76% identity) | M.Vca796ORF5780AP | |
| 5790 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 810 | type II toxin-antitoxin system RelE/ParE family | |||
| 815 | RM | Vsp39ORF320P (94% identity) | Vca796ORF815P | |
| 820 | Fic/DOC family N-terminal domain-containing | |||
| 1990 | ACT domain-containing protein | |||
| 1995 | M | M.Vsp39ORF1508P (88% identity) | M.Vca796ORF1995P | |
| 2000 | DUF4921 family protein | |||
| 4515 | 278 aa hypothetical protein | |||
| 4520 | RM | Mmu11658ORF1307P (66% identity) | Vca796ORF4520P | |
| 4525 | 497 aa hypothetical protein | |||
| 5105 | 249 aa hypothetical protein | |||
| 5110 | R | CleDORF3217P (91% identity) | Vca796ORF5115P | |
| 5115 | M | M.Lba5GORFNP (12% identity) | M.Vca796ORF5115AP | |
| 5120 | M | M.Ral7ORF2514P (30% identity) | M.Vca796ORF5115BP | |
| 5125 | M | M.CleDORF3217P (35% identity) | M.Vca796ORF5115CP | |
| 5130 | TnpV protein | |||
| 7475 | virulence protein | |||
| 7480 | M | M2.Ane8396AORF993P (93% identity) | M.Vca796ORF7480P | |
| 7485 | site-specific DNA-methyltransferase | |||
| 7480 | DNA cytosine methyltransferase | |||
| 7485 | M | M1.Dji32TORF1955P (96% identity) | M.Vca796ORF7485P | |
| 7490 | methionine adenosyltransferase | |||
| 7975 | methionine adenosyltransferase | |||
| 7980 | M | M2.Cpy3ORF2255P (96% identity) | M.Vca796ORF7980P | |
| 7985 | DNA (cytosine-5-)-methyltransferase | |||
| 7980 | site-specific DNA-methyltransferase | |||
| 7985 | M | M1.Cpy3ORF2255P (99% identity) | M.Vca796ORF7985AP | |
| 7995 | metal ABC transporter permease | |||
| 8000 | metal ABC transporter ATP-binding protein | |||
| 8005 | zinc ABC transporter substrate-binding protein | |||
| 8010 | zinc ABC transporter substrate-binding protein | |||
| 8015 | class I tRNA ligase family protein | |||
| 8020 | M | M.Wne0125ORF7390P (26% identity) | M.Vca796ORF7985BP | |
| 8025 | 71 aa hypothetical protein | |||
| 8705 | ATP-binding protein | |||
| 8710 | M | M.Cpi11862II (43% identity) | M.Vca796ORF8710P | |
| 8715 | PD-(D/E)XK nuclease family protein | |||
| 8725 | 194 aa hypothetical protein | |||
| 8730 | M | M.Aur0759ORF5630P (35% identity) | M.Vca796ORF8730P | |
| 8735 | 64 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7595 | helix-turn-helix domain-containing protein | |||
| 7600 | M | M.Mmu35239ORF181P (39% identity) | M.Vca796ORF7600AP | |
| 7605 | M | M.Mmu35239ORF181P (49% identity) | M.Vca796ORF7600BP | |
| 7610 | R | Mmu35239ORF181P (100% identity) | Vca796ORF7600P | |
| 7615 | DUF1837 domain-containing protein | |||