Escherichia coli AHM8C212RI |
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Putative Escherichia coli AHM8C212RI RM systems
Ref: He,W. et al. J Hazard Mater 446, 130725 (2023)
REBASE ref # 36917
Complete sequence: 4,901,254 bp
GenBank #: CP104613
REBASE acronym: Eco212R
Org_num: 67968
All begin N5856_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2345 | endoribonuclease SymE | |||
| 2350 | R | Eco160RORF2360P (100% identity) | Eco212RORF2360P | |
| 2355 | S | S.EcoLR13ORF25400P (100% identity) | S.Eco212RORF2360P | |
| 2360 | M | M.EcoLR13ORF25400P (100% identity) | M.Eco212RORF2360P | |
| 2365 | restriction endonuclease | |||
| 7985 | IS3 family transposase | |||
| ??? | S | S.EcoVA2ORFHP (100% identity) | S.Eco212RORF8020P | |
| 7995 | IS5-like element ISKpn26 family transposase | |||
| 8000 | IS256 family transposase | |||
| 8005 | polysaccharide pyruvyl transferase family | |||
| 8010 | glycosyltransferase | |||
| 8015 | IS1-like element IS1B family transposase | |||
| ??? | cryptic C4-dicarboxylate transporter DcuD | |||
| 8020 | M | M.EcosEC21ORF13545P (100% identity) | M.Eco212RORF8020P | |
| 8025 | GTPase family protein | |||
| 18870 | GTPase family protein | |||
| 18875 | M | M.Kpnb12LORF3425P (100% identity) | M.Eco212RORF18875P | |
| 18880 | S | S.Kpnb12LORF3425P (100% identity) | S.Eco212RORF18875P | |
| 18885 | R | Kpnb12LORF3425P (100% identity) | Eco212RORF18875P | |
| 18890 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2160 | 332 aa hypothetical protein | |||
| 2165 | R | EcoLR13ORF25810P (100% identity) | Eco212RORF2165P | |
| 2170 | HNH endonuclease | |||
| 12455 | drug/metabolite exporter YedA | |||
| 12460 | V | V.EcoR42DcmP (100% identity) | V.Eco212RDcmP | |
| 12465 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco212RDcmP |
| 12470 | phosphohydrolase | |||
| 14900 | NinE family protein | |||
| 14905 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco212RORF14905P |
| 14910 | recombination protein NinB | |||
| 18120 | BREX system P-loop protein BrxC | |||
| 18125 | RM | EcoP19598ORF21290P (100% identity) | Eco212RORF18125P | |
| 18130 | BREX-1 system phosphatase PglZ type A | |||
| 20020 | DNA-binding transcriptional regulator Fis | |||
| 20025 | M | M.Eco160RORF20025P (100% identity) | ATGCAT | M.Eco212RORF20025P |
| 20030 | DUF2556 family protein | |||
| 20585 | ribulose-phosphate 3-epimerase | |||
| 20590 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco212RDamP |
| 20595 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2360 | type I restriction-modification system subunit | |||
| 2365 | R | EfeE4C07MrrP (100% identity) | Eco212RMrrP | |
| 2370 | BrnT family toxin | |||