Photobacterium damselae Pdd1411 |
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Putative Photobacterium damselae Pdd1411 RM systems
Ref: Zhang,Z. unpublished
REBASE ref # 26470
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,205,846 bp | CP074084 |
| chromosome 2: | 1,347,563 bp | CP074085 |
| plasmid p1: | 55,626 bp | CP074086 |
REBASE acronym: Pda1411
Org_num: 68139
All begin KFZ68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 11740 | DUF1837 domain-containing protein | |||
| 11745 | R | Vca502ORF5505P (98% identity) | Pda1411ORF11755P | |
| 11750 | S | S.KpnsST307aORF23170P (69% identity) | S.Pda1411ORF11755P | |
| 11755 | M | M2.VsiT47ORF13430P (95% identity) | M2.Pda1411ORF11755P | |
| 11760 | M | M1.Vvu2444ORFEP (99% identity) | M1.Pda1411ORF11755P | |
| 11765 | helix-turn-helix domain-containing protein | |||
| chromosome 2 | ||||
| 15890 | TniB family NTP-binding protein | |||
| 15895 | R | PdaWMDP3ORF18465P (99% identity) | Pda1411ORF15915P | |
| 15900 | DUF262 domain-containing protein | |||
| 15905 | DUF262 domain-containing protein | |||
| 15910 | S | S.Vha1164ORFCP (61% identity) | S.Pda1411ORF15915P | |
| 15915 | M | M.PdaWMDP3ORF18465P (97% identity) | M.Pda1411ORF15915P | |
| 15920 | WYL domain-containing protein | |||
| 19345 | ATP-binding protein | |||
| 19350 | M | M.Pda2008ORF2670P (97% identity) | M.Pda1411ORF19350P | |
| 19355 | S | S.PciZF2ORF19890P (60% identity) | S.Pda1411ORF19350P | |
| 19360 | SIR2 family protein | |||
| 19365 | R | PdaWu1ORF17560P (90% identity) | Pda1411ORF19350P | |
| 19370 | SLATT domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1000 | AAA family ATPase | |||
| 1005 | M | M.PdaNa1I (100% identity) | GATC | M.Pda1411DamP |
| 1010 | DUF2970 domain-containing protein | |||
| chromosome 2 | ||||
| 19260 | HD domain-containing protein | |||
| 19265 | M | M.PdaNHLM2ORF260P (100% identity) | M.Pda1411ORF19265P | |
| 19270 | alpha/beta fold hydrolase | |||
| plasmid p1 | ||||
| 20535 | AAA family ATPase | |||
| 20540 | S | S.PanA103ORF10360P (45% identity) | S.Pda1411ORF20545P | |
| 20545 | RM | SdeOSI (92% identity) | Pda1411ORF20545P | |
| 20550 | 170 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8005 | glutaredoxin family protein | |||
| 8010 | R | VhaSB1ORF5345P (93% identity) | Pda1411ORF8010P | |
| 8015 | GIY-YIG nuclease family protein | |||