Photobacterium damselae Pdd0210 |
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Putative Photobacterium damselae Pdd0210 RM systems
Ref: Zhang,Z. unpublished
REBASE ref # 26470
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,075,387 bp | CP074080 |
| chromosome 2: | 1,267,353 bp | CP074081 |
| plasmid p1: | 258,200 bp | CP074082 |
REBASE acronym: Pda210
Org_num: 68137
All begin KFZ67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 11650 | tyrosine-type recombinase/integrase | |||
| 11655 | R | VpaTJ187ORF15220P (84% identity) | Pda210ORF11670P | |
| 11660 | AAA family ATPase | |||
| 11665 | S | S.Mpa9ORF10765P (75% identity) | S.Pda210ORF11670P | |
| 11670 | M | M.Sin1489ORF7680P (82% identity) | M.Pda210ORF11670P | |
| 11675 | helix-turn-helix domain-containing protein | |||
| chromosome 2 | ||||
| 15790 | M48 family metallopeptidase | |||
| 15795 | R | ValE110ORF150P (95% identity) | Pda210ORF15805P | |
| 15800 | S | S.Vvu214277ORFAP (56% identity) | S.Pda210ORF15805P | |
| 15805 | M | M.ValHNV2ORF21415P (95% identity) | M.Pda210ORF15805P | |
| 15810 | AlpA family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1025 | AAA family ATPase | |||
| 1030 | M | M.PdaXP11DamP (100% identity) | GATC | M.Pda210DamP |
| 1035 | DUF2970 domain-containing protein | |||
| chromosome 2 | ||||
| 14370 | HD domain-containing protein | |||
| 14375 | M | M.Pda39429ORF15890P (100% identity) | M.Pda210ORF14375P | |
| 14380 | alpha/beta fold hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p1 | ||||
| 19545 | DUF4391 domain-containing protein | |||
| 19550 | M | M.XhoVT106ORF17425P (67% identity) | M.Pda210ORF19550P | |
| 19555 | R | Val1831ORF10830P (98% identity) | Pda210ORF19550P | |
| 19560 | DUF1870 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 15675 | UvrD-helicase domain-containing protein | |||
| 15680 | R | Pda2008McrCP (96% identity) | Pda210McrCP | |
| ??? | R | Pda2008McrBP (96% identity) | Pda210McrBP | |
| 15690 | tyrosine-type recombinase/integrase | |||