Klebsiella pasteurii AHM8C130-1I |
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Putative Klebsiella pasteurii AHM8C130-1I RM systems
Ref: He,W. et al. J Hazard Mater 446, 130725 (2023)
REBASE ref # 36917
| Sequence length: | GenBank #: | |
| Chromosome: | 5,959,193 bp | CP104925 |
| plasmid pHNAH8130: | 159,878 bp | CP104926 |
| plasmid pHNAH8130-2: | 53,246 bp | CP104928 |
REBASE acronym: Kpa1301
Org_num: 68023
All begin N5863_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24670 | restriction endonuclease | |||
| 24675 | M | M.Kqu81ORF4247P (98% identity) | M.Kpa1301ORF24675P | |
| 24680 | S | S.KmiX21ORFDP (94% identity) | S.Kpa1301ORF24675P | |
| 24685 | R | Kpa205ORF10085P (98% identity) | Kpa1301ORF24675P | |
| 24690 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1895 | cell division protein DamX | |||
| 1900 | M | M.KspF3aDamP (100% identity) | GATC | M.Kpa1301DamP |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 9785 | phosphohydrolase | |||
| 9790 | M | M.KspF3aDcmP (100% identity) | CCWGG | M.Kpa1301DcmP |
| 9795 | V | V.KspF3aDcmP (100% identity) | V.Kpa1301DcmP | |
| 9800 | drug/metabolite exporter YedA | |||
| 16230 | replication endonuclease | |||
| 16235 | M | M.KpnKKp29ORF26430P (99% identity) | M.Kpa1301ORF16235P | |
| 16240 | 3-5 exoribonuclease | |||
| 16585 | tellurite/colicin resistance protein | |||
| 16590 | M | M.Kmi166ORF7910P (99% identity) | M.Kpa1301ORF16590P | |
| 16595 | TrmB family transcriptional regulator | |||
| 16620 | SOS-response repressor and protease LexA | |||
| 16625 | M | M.KmiX21ORFKP (98% identity) | M1.Kpa1301ORF16625P | |
| 16630 | M | M1.Kmi27ORF3330P (99% identity) | M2.Kpa1301ORF16625P | |
| 16635 | 152 aa hypothetical protein | |||
| 18920 | YlcG family protein | |||
| 18925 | M | M.Ksp6FORF9800P (99% identity) | M.Kpa1301ORF18925P | |
| 18930 | Ref family protein | |||
| plasmid pHNAH8130 | ||||
| 28740 | 100 aa hypothetical protein | |||
| 28745 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Kpa1301ORF28745P |
| 28750 | 143 aa hypothetical protein | |||
| plasmid pHNAH8130-2 | ||||
| 29605 | winged helix-turn-helix domain-containing | |||
| 29610 | M | M.Kpn4874ORF27695P (96% identity) | M.Kpa1301ORF29610P | |
| 29615 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17205 | integrase | |||
| 17210 | M | M.EcoR15ORF20170P (95% identity) | M.Kpa1301ORF17210P | |
| 17215 | R | Kpn0066ORF16315P (94% identity) | Kpa1301ORF17210P | |
| 17220 | prepilin-type N-terminal cleavage/methylation | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24660 | 130 aa hypothetical protein | |||
| 24665 | R | KmiX21McrBP (100% identity) | Kpa1301McrBP | |
| 24670 | R | Kmi34BMcrCP (99% identity) | Kpa1301McrCP | |
| 24675 | type I restriction-modification system subunit | |||