Escherichia coli O25b:H4-ST131 |
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Putative Escherichia coli O25b:H4-ST131 RM systems
Ref: Cave,R. unpublished
REBASE ref # 36931
| Sequence length: | GenBank #: | |
| chromosome C: | 4,922,175 bp | OX637959 |
| chromosome C: | 4,918,295 bp | OX637961 |
| chromosome C: | 5,159,704 bp | OY019088 |
| chromosome C: | 5,185,826 bp | OX637964 |
| plasmid P1: | 146,919 bp | OX637962 |
| plasmid P1: | 123,938 bp | OX637965 |
| plasmid P1: | 162,859 bp | OX637960 |
| plasmid P2: | 78,028 bp | OX637963 |
| plasmid P2: | 100,743 bp | OY019090 |
| plasmid P2: | 74,854 bp | OX637966 |
REBASE acronym:
Org_num:
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome C | ||||
| ??? | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoST131cORFEP |
| ??? | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoST131cORFEP |
| ??? | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoST131cORFEP |
| chromosome C | ||||
| ??? | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoST131dORFFP |
| ??? | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoST131dORFFP |
| ??? | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoST131dORFFP |
| chromosome C | ||||
| ??? | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoH4ORFGP |
| ??? | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoH4ORFGP |
| ??? | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoH4ORFGP |
| chromosome C | ||||
| ??? | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoST131bORFFP |
| ??? | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoST131bORFFP |
| ??? | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoST131bORFFP |
| ??? | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoST131bORFGP |
| ??? | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoST131bORFGP |
| ??? | R | SdySWHE2ORF4295P (19% identity) | RTACNNNNGTG | EcoST131bORFGAP |
| ??? | R | EcosS9ORF3165P (79% identity) | RTACNNNNGTG | EcoST131bORFGBP |
| plasmid P1 | ||||
| ??? | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoST131cORFDP |
| ??? | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoST131cORFDP |
| ??? | M | M.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | M.EcoST131cORFDP |
| plasmid P1 | ||||
| ??? | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoST131dORFEP |
| ??? | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoST131dORFEP |
| ??? | M | M.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | M.EcoST131dORFEP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome C | ||||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoST131cDamP |
| ??? | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoST131cDcmP |
| ??? | V | V.SflC32DcmP (100% identity) | V.EcoST131cDcmP | |
| ??? | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoST131cORFFP |
| ??? | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoST131cORFFP |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoST131cORFFP |
| ??? | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoST131cORFGP |
| ??? | R | Ecos19ORF20635P (100% identity) | EcoST131cORFBP | |
| chromosome C | ||||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoST131dDamP |
| ??? | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoST131dDcmP |
| ??? | V | V.SflC32DcmP (100% identity) | V.EcoST131dDcmP | |
| ??? | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoST131dORFGP |
| ??? | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoST131dORFGP |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoST131dORFGP |
| ??? | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoST131dORFHP |
| ??? | R | Ecos19ORF20635P (100% identity) | EcoST131dORFBP | |
| chromosome C | ||||
| ??? | V | V.SflC32DcmP (100% identity) | V.EcoH4DcmP | |
| ??? | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoH4DcmP |
| ??? | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoH4ORFDP |
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoH4DamP |
| ??? | M | M.Mxa6833447ORFBP (100% identity) | M.EcoH4ORFEP | |
| ??? | R | EcosS3ORF15775P (100% identity) | EcoH4ORFEP | |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoH4ORFFP |
| ??? | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoH4ORFFP |
| ??? | R | EcosS9ORF2810P (62% identity) | GGTCTC | EcoH4ORFFBP |
| ??? | R | EcosS9ORF2810P (33% identity) | GGTCTC | EcoH4ORFFAP |
| ??? | M | M.KpnYN1ORFGP (100% identity) | M.EcoH4ORFHP | |
| ??? | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoH4ORFIP |
| chromosome C | ||||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoST131bDamP |
| ??? | M | M.EcoSL40ORF15185P (100% identity) | M.EcoST131bORFEP | |
| ??? | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoST131bDcmP |
| ??? | V | V.SflC32DcmP (100% identity) | V.EcoST131bDcmP | |
| ??? | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoST131bORFKP |
| ??? | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoST131bORFKP |
| ??? | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoST131bORFKP |
| ??? | M | M.EcosR8ORF13190P (100% identity) | A | M.EcoST131bORFJP |
| ??? | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoST131bORFIP |
| ??? | M | M.KpnYN1ORFGP (100% identity) | M.EcoST131bORFBP | |
| ??? | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoST131bORFHP |
| ??? | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoST131bORFHP |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoST131bORFHP |
| plasmid P1 | ||||
| ??? | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoST131dORFDP |
| plasmid P1 | ||||
| ??? | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoST131bORFDP |
| plasmid P1 | ||||
| ??? | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoST131cORFCP |
| plasmid P2 | ||||
| ??? | M | M.Xca80ORFEP (100% identity) | M.EcoST131dORFCP | |
| plasmid P2 | ||||
| ??? | M | M.Eco961ORF25045P (100% identity) | M.EcoH4ORFBP | |
| plasmid P2 | ||||
| ??? | M | M.Sfl7ORF23565P (100% identity) | M.EcoST131bORFCP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome C | ||||
| ??? | R | EcosS3McrBP (100% identity) | EcoST131cMcrBP | |
| ??? | R | EcosS9McrCP (100% identity) | EcoST131cMcrCP | |
| chromosome C | ||||
| ??? | R | EcosS3McrBP (100% identity) | EcoST131dMcrBP | |
| ??? | R | EcosS9McrCP (100% identity) | EcoST131dMcrCP | |
| chromosome C | ||||
| ??? | R | EcosS9McrCP (100% identity) | EcoH4McrCP | |
| ??? | R | EcosS3McrBP (100% identity) | EcoH4McrBP | |
| ??? | R | Ecou021MrrP (95% identity) | EcoH4MrrP | |
| chromosome C | ||||
| ??? | R | Ecou021MrrP (95% identity) | EcoST131bMrrP | |
| ??? | R | EcosS3McrBP (100% identity) | EcoST131bMcrBP | |
| ??? | R | EcosS9McrCP (100% identity) | EcoST131bMcrCP | |