Escherichia coli JNE141411 |
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Putative Escherichia coli JNE141411 RM systems
Ref: Kubomura,A. et al. unpublished
REBASE ref # 36930
| Sequence length: | GenBank #: | |
| Chromosome: | 5,061,037 bp | AP027256 |
| plasmid pJNE141411-1: | 173,999 bp | AP027257 |
REBASE acronym: Eco1411
Org_num: 67990
All begin JNE141411_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 45950 | 228 aa hypothetical protein | |||
| 45960 | S | S.EcoE6ORF20695P (100% identity) | S.Eco1411ORF45970P | |
| 45970 | M | M.EcoE6ORF20695P (99% identity) | M.Eco1411ORF45970P | |
| 45980 | R | EcoE6ORF20695P (100% identity) | Eco1411ORF45970P | |
| 45990 | 50 aa hypothetical protein | |||
| 46200 | 428 aa hypothetical protein | |||
| 46210 | S | S.EcosC41ORF5210P (98% identity) | GCAGNNNNNTGT | S.Eco1411ORF46220P |
| 46220 | M | M.EcosC41ORF5210P (100% identity) | GCAGNNNNNTGT | M.Eco1411ORF46220P |
| 46230 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13060 | 65 aa hypothetical protein | |||
| ??? | M | M.Eco685ORF13310P (100% identity) | M.Eco1411ORF13080P | |
| 13090 | 142 aa hypothetical protein | |||
| 21190 | amino acid exporter for phenylalanine | |||
| 21200 | V | V.EcoPSS16DcmP (99% identity) | V.Eco1411DcmP | |
| 21210 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1411DcmP |
| 21220 | HD superfamily phosphohydrolase | |||
| 36130 | D-ribulose-5-phosphate 3-epimerase | |||
| 36140 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1411DamP |
| 36150 | cell division protein DamX | |||
| 43300 | 162 aa hypothetical protein | |||
| 43310 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco1411ORF43310P |
| 43320 | repressor | |||
| 43370 | 65 aa hypothetical protein | |||
| 43380 | M | M.Eco14516ORF21590P (100% identity) | M.Eco1411ORF43380P | |
| 43390 | Shiga toxin 2 subunit A | |||
| 45910 | integrase | |||
| 45920 | R | EcoE6ORF20720P (100% identity) | GAAC | Eco1411ORF45920P |
| 45930 | 5-nucleotidase | |||
| 46250 | ATP-binding protein | |||
| 46260 | R | EcosC41ORF5230P (100% identity) | Eco1411ORF46260P | |
| 46270 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| plasmid pJNE141411-1 | ||||
| 48260 | 308 aa hypothetical protein | |||
| 48270 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco1411ORF48270P |
| 48280 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 46230 | 128 aa hypothetical protein | |||
| 46240 | R | Ecows53McrCP (100% identity) | Eco1411McrCP | |
| 46250 | R | SflN101McrBP (100% identity) | Eco1411McrBP | |
| 46260 | restriction endonuclease | |||