Phocaeicola dorei 1 |
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Putative Phocaeicola dorei 1 RM systems
Ref: Kijner,S. et al. Nat Commun (2023) In press
REBASE ref # 36958
Complete sequence: 5,554,369 bp
GenBank #: CP126064
REBASE acronym: Pdo1
Org_num: 68135
All begin QMY64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14735 | fimbrillin family protein | |||
| 14740 | S | S5.Pdo1047IIP (65% identity) | S5.Pdo1ORF14765P | |
| 14745 | S | S5.Pdo2ORF18935P (40% identity) | S4.Pdo1ORF14765P | |
| ??? | S | S3.Pdo2ORF18935P (100% identity) | S3.Pdo1ORF14765P | |
| 14755 | S | S2.Bfr604ORF10485P (93% identity) | S2.Pdo1ORF14765P | |
| 14760 | S | S1.Pdo1051IP (99% identity) | S1.Pdo1ORF14765P | |
| 14765 | M | M.Pdo3C03ORF2038P (100% identity) | M.Pdo1ORF14765P | |
| 14770 | R | Pdo1051IP (100% identity) | Pdo1ORF14765P | |
| 14775 | C | C.Pvu201ORF22395P (100% identity) | C.Pdo1ORF14765P | |
| 14780 | GIY-YIG nuclease family protein | |||
| 17155 | S-adenosylmethionine:tRNA | |||
| ??? | M | M.PmeBin22ORFCP (99% identity) | M.Pdo1ORF17160P | |
| 17175 | S | S1.Pdo2ORF20950P (100% identity) | CAAYNNNNNNNTGAY | S1.Pdo1ORF17160P |
| 17180 | S | S2.Pdo2ORF20950P (43% identity) | S2.Pdo1ORF17160P | |
| 17185 | S | S2.Pdo2ORF20950P (56% identity) | S3.Pdo1ORF17160P | |
| ??? | R | Pdo1047IP (97% identity) | Pdo1ORF17160P | |
| 17205 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1255 | ATP-binding protein | |||
| 1260 | M | M.Bsp7301ORF645P (80% identity) | M.Pdo1ORF1260P | |
| 1265 | DUF5712 family protein | |||
| 4805 | 217 aa hypothetical protein | |||
| 4810 | V | V.Bth40ORF23695P (91% identity) | V.Pdo1ORF4845P | |
| 4815 | AAA family ATPase | |||
| 4820 | 63 aa hypothetical protein | |||
| 4825 | 220 aa hypothetical protein | |||
| 4830 | DUF2357 domain-containing protein | |||
| 4835 | 116 aa hypothetical protein | |||
| 4840 | AAA family ATPase | |||
| 4845 | M | M.BneMS4ORFOP (93% identity) | M.Pdo1ORF4845P | |
| 4850 | C | C.BneMS4ORFOP (97% identity) | C.Pdo1ORF4845P | |
| 4855 | 235 aa hypothetical protein | |||
| 8870 | 105 aa hypothetical protein | |||
| ??? | M | M.Pdo3C03ORF694P (95% identity) | M.Pdo1ORF8875P | |
| 8890 | PcfJ domain-containing protein | |||
| 13310 | alpha-amylase family protein | |||
| 13315 | R | Pdo3C03ORF1868P (100% identity) | Pdo1ORF13315P | |
| 13320 | linear amide C-N hydrolase | |||
| 19020 | AbiH family protein | |||
| 19025 | M | M.PmeBin675ORFAP (100% identity) | M.Pdo1ORF19025P | |
| 19030 | 144 aa hypothetical protein | |||