Phocaeicola dorei 2 |
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Putative Phocaeicola dorei 2 RM systems
Ref: Kijner,S. et al. Nat Commun (2023) In press
REBASE ref # 36958
Complete sequence: 5,484,726 bp
GenBank #: CP126056
REBASE acronym: Pdo2
Org_num: 68136
All begin QNN11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18905 | 98 aa hypothetical protein | |||
| 18910 | S | S1.Bdo12C01ORF1796P (59% identity) | S5.Pdo2ORF18935P | |
| 18915 | S | S3.Pdo1047IIP (100% identity) | S4.Pdo2ORF18935P | |
| ??? | S | S3.Pdo1ORF14765P (100% identity) | S3.Pdo2ORF18935P | |
| 18925 | S | S5.Pdo1047IIP (88% identity) | S2.Pdo2ORF18935P | |
| 18930 | S | S1.PvuC06ORF3690P (99% identity) | S1.Pdo2ORF18935P | |
| 18935 | M | M.Pdo3C03ORF2038P (100% identity) | M.Pdo2ORF18935P | |
| 18940 | R | PvuC06ORF3690P (98% identity) | Pdo2ORF18935P | |
| 18945 | DUF1524 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 705 | 552 aa hypothetical protein | |||
| 710 | M | M.PmeBin675ORFAP (89% identity) | M.Pdo2ORF710P | |
| 715 | 144 aa hypothetical protein | |||
| 3785 | 80 aa hypothetical protein | |||
| 3790 | M | M.Pvu191ORF3365P (99% identity) | M.Pdo2ORF3790P | |
| 3795 | 103 aa hypothetical protein | |||
| 4065 | site-specific integrase | |||
| 4070 | M | M.Bfr1ORF13640P (78% identity) | M.Pdo2ORF4070P | |
| 4075 | R | Ppa700821ORF351P (53% identity) | Pdo2ORF4070P | |
| 4080 | serine dehydrogenasease | |||
| 15800 | restriction endonuclease subunit M | |||
| ??? | RM | Pvu1ORF20820P (70% identity) | Pdo2ORF15805P | |
| 15820 | 65 aa hypothetical protein | |||
| 16255 | restriction endonuclease | |||
| 16260 | C | C.Pdo3C03ORF1413P (100% identity) | C.Pdo2ORF16265P | |
| ??? | M | M.Pdo3C03ORF1413P (99% identity) | M.Pdo2ORF16265P | |
| 16275 | S | S.Bdo12C01ORF3632P (100% identity) | S.Pdo2ORF16265P | |
| 16280 | protein kinase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15855 | 415 aa hypothetical protein | |||
| 15860 | R | BthDOT2GmrSDP (88% identity) | Pdo2GmrSDP | |
| 15865 | C39 family peptidase | |||