Vibrio parahaemolyticus PH1273 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio parahaemolyticus PH1273 RM systems
Ref: Santos,M.N. et al. unpublished
REBASE ref # 36877
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,411,604 bp | CP114186 |
| plasmid unnamed1: | 268,745 bp | CP114188 |
REBASE acronym: Vpa1273
Org_num: 67738
All begin O2T11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3360 | SprT family zinc-dependent metalloprotease | |||
| 3365 | R | VpaFB11ORF12235P (99% identity) | Vpa1273ORF3375P | |
| 3370 | S | S.Val10675II (62% identity) | S.Vpa1273ORF3375P | |
| 3375 | M | M.VpaS02ORFBP (94% identity) | M.Vpa1273ORF3375P | |
| 3380 | 802 aa hypothetical protein | |||
| 13280 | integrase | |||
| 13285 | M | M.VspF64ORF2335P (36% identity) | M.Vpa1273ORF13330BP | |
| 13290 | IS200/IS605 family transposase | |||
| 13295 | TetR/AcrR family transcriptional regulator | |||
| 13300 | PTS transporter subunit EIIC | |||
| 13305 | PTS lactose/cellobiose transporter subunit IIA | |||
| 13310 | glycoside hydrolase family 1 protein | |||
| 13315 | IS21 family transposase | |||
| 13320 | IS21-like element ISVch3 family helper ATPase | |||
| 13325 | IS3 family transposase | |||
| 13330 | M | M.Vpa2141ORF13340P (43% identity) | M.Vpa1273ORF13330AP | |
| 13335 | anaerobic sulfatase maturase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 14505 | ribulose-phosphate 3-epimerase | |||
| 14510 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa1273DamP |
| 14515 | AAA family ATPase | |||
| plasmid unnamed1 | ||||
| 24805 | HNH endonuclease signature motif containing | |||
| 24810 | M | M.VpaS5ORFBP (99% identity) | M.Vpa1273ORF24810P | |
| 24815 | 143 aa hypothetical protein | |||
| 24855 | 99 aa hypothetical protein | |||
| 24860 | M | M.VdiNV27ORF23890P (97% identity) | M.Vpa1273ORF24860P | |
| 24865 | 153 aa hypothetical protein | |||
| 25540 | 132 aa hypothetical protein | |||
| 25545 | M | M.VdiNV27ORF23290P (98% identity) | M.Vpa1273ORF25545P | |
| 25550 | 105 aa hypothetical protein | |||