Rothia species SD9660Na |
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Putative Rothia species SD9660Na RM systems
Ref: Collaud,A. and Perreten,V. unpublished
REBASE ref # 32402
Complete sequence: 2,375,744 bp
GenBank #: CP125946
REBASE acronym: RspNa
Org_num: 67606
All begin QM007_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6270 | ABC transporter ATP-binding protein | |||
| 6275 | R | Rna6032ORFGP (97% identity) | RspNaORF6285P | |
| 6280 | nucleotidyltransferase domain-containing | |||
| 6285 | M | M.RnaPT32ORF5830P (99% identity) | M.RspNaORF6285P | |
| 6290 | S | S.Rae1137ORF1255P (31% identity) | S.RspNaORF6285P | |
| 6295 | 127 aa hypothetical protein | |||
| 6750 | PhzF family phenazine biosynthesis protein | |||
| 6755 | M | M.Rna6032ORFFP (97% identity) | M.RspNaORF6755P | |
| 6760 | S | S.KvaG6ORFAP (26% identity) | S.RspNaORF6755P | |
| 6765 | 128 aa hypothetical protein | |||
| 6770 | 179 aa hypothetical protein | |||
| 6775 | 328 aa hypothetical protein | |||
| 6780 | R | Rna6032ORFFP (20% identity) | RspNaORF6755AP | |
| 6785 | R | Rna6032ORFFP (71% identity) | RspNaORF6755BP | |
| 6790 | Abi family protein | |||
| 8030 | Abi family protein | |||
| ??? | R | Uclbin18ORFAP (50% identity) | RspNaORF8055P | |
| 8045 | S | S2.Fnu2517IIP (27% identity) | S.RspNaORF8055P | |
| 8050 | DUF262 domain-containing protein | |||
| 8055 | M | M.CspB1ORF51P (67% identity) | M.RspNaORF8055P | |
| 8060 | NAD(P)H-dependent oxidoreductase | |||
| 10510 | 101 aa hypothetical protein | |||
| 10515 | R | MspD987ORF2375P (38% identity) | RspNaORF10545P | |
| 10520 | ImmA/IrrE family metallo-endopeptidase | |||
| 10525 | DUF4411 family protein | |||
| 10530 | 478 aa hypothetical protein | |||
| 10535 | 209 aa hypothetical protein | |||
| 10540 | S | S.Rmu369I (25% identity) | S.RspNaORF10545P | |
| 10545 | M | M.Kro13ORF17940P (57% identity) | M.RspNaORF10545P | |
| 10550 | 706 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5570 | metalloregulator ArsR/SmtB family transcription | |||
| 5575 | M | M.Rna6032ORFHP (93% identity) | M.RspNaORF5575P | |
| 5580 | 72 aa hypothetical protein | |||
| 7725 | DNA-3-methyladenine glycosylase I | |||
| 7730 | R | Rna6032ORFAP (87% identity) | RspNaORF7735P | |
| 7735 | M | M.Rna6032ORFAP (77% identity) | M.RspNaORF7735P | |
| 7740 | 128 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1120 | DUF6318 family protein | |||
| 1125 | R | Rkr932ORF380P (61% identity) | RspNaORF1125P | |
| 1130 | prephenate dehydratase | |||