Helicobacter pylori GCT85 |
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Putative Helicobacter pylori GCT85 RM systems
Ref: Guevara-Tique,A. et al. unpublished
REBASE ref # 36786
Complete sequence: 1,623,483 bp
GenBank #: CP071937
REBASE acronym: HpyGCT85
Org_num: 67429
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyMT5136ORF2140P (93% identity) | CACNNNNNTC | HpyGCT85ORFSP |
| ??? | M | M.HpyPR04IV (94% identity) | CACNNNNNTC | M.HpyGCT85ORFSP |
| ??? | S | S.HpySW18ORF2190P (98% identity) | CACNNNNNTC | S.HpyGCT85ORFSP |
| ??? | M | M.HpySP318XVII (96% identity) | M.HpyGCT85ORFXP | |
| ??? | S | S.HpyNY40ORF1472P (54% identity) | S1.HpyGCT85ORFXP | |
| ??? | S | S.HpyBR14ORF4220P (43% identity) | S2.HpyGCT85ORFXP | |
| ??? | R | HpyMT5125ORF4185P (96% identity) | HpyGCT85ORFXP | |
| ??? | S | S.HpyC107ORF7645P (44% identity) | S2.HpyGCT85ORFZP | |
| ??? | S | S.HpyCOL113ORF7465P (43% identity) | S1.HpyGCT85ORFZP | |
| ??? | M | M.HpySP201XIV (94% identity) | M.HpyGCT85ORFZP | |
| ??? | R | HpyU418VP (94% identity) | HpyGCT85ORFZP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyPO04ORF2300P (96% identity) | ACGT | HpyGCT85ORFVP |
| ??? | M | M.Hpy5019ORF7850P (98% identity) | ACGT | M.HpyGCT85ORFVP |
| ??? | R | HpyNCI22ORFC1P (99% identity) | ACNGT | HpyGCT85ORFUP |
| ??? | M | M.HpySP207II (99% identity) | ACNGT | M.HpyGCT85ORFUP |
| ??? | M | M.HpyMTT03ORFAP (100% identity) | ATTAAT | M.HpyGCT85ORFTP |
| ??? | R | HpySP606XP (96% identity) | GTAC | HpyGCT85ORFRP |
| ??? | M | M.HpyGCT17ORFVP (99% identity) | GTAC | M.HpyGCT85ORFRP |
| ??? | M | M1.HpyCOL8VI (98% identity) | CCTC | M1.HpyGCT85ORFPP |
| ??? | M | M2.HpyNCI57VP (94% identity) | M2.HpyGCT85ORFPP | |
| ??? | M | M.HpyH018IX (100% identity) | GTSAC | M.HpyGCT85ORFQP |
| ??? | R | HpyGCT17ORFYP (100% identity) | GTSAC | HpyGCT85ORFQP |
| ??? | R | HpyCOL112VIIP (100% identity) | GATC | HpyGCT85ORFOP |
| ??? | M | M.HpyCOL106VII (98% identity) | GATC | M.HpyGCT85ORFOP |
| ??? | M | M.HpyGCT17ORFXP (96% identity) | M.HpyGCT85ORFNBP | |
| ??? | M | M2.Hpyfe93ORF7110P (65% identity) | M.HpyGCT85ORFNAP | |
| ??? | M | M.HpySP312ORF5280P (80% identity) | M.HpyGCT85ORFWP | |
| ??? | R | HpyH025ORF1735P (98% identity) | TCNNGA | HpyGCT85ORFWP |
| ??? | R | HpyR06XP (90% identity) | GTNNAC | HpyGCT85ORFKP |
| ??? | M | M.HpyME44XI (90% identity) | GTNNAC | M.HpyGCT85ORFKP |
| ??? | S | S.Hpy14039ORFDP (66% identity) | CYANNNNNNTGA | S.HpyGCT85ORFJP |
| ??? | RM | HpyDO9ORF6765P (98% identity) | HpyGCT85ORFJP | |
| ??? | RM | HpyBGR4XVI (90% identity) | HpyGCT85ORFIP | |
| ??? | M | M.HpyNCI55IV (97% identity) | TCGA | M.HpyGCT85ORFGP |
| ??? | R | HpyU008IIIP (96% identity) | CCGG | HpyGCT85ORFHP |
| ??? | M | M.HpyME23IV (98% identity) | CCGG | M.HpyGCT85ORFHP |
| ??? | RM | HpyC023ORF6580P (65% identity) | HpyGCT85ORFFP | |
| ??? | M | M.HpyPE13VII (100% identity) | GANTC | M.HpyGCT85ORFEP |
| ??? | R | HpyCOL107VIIP (99% identity) | GANTC | HpyGCT85ORFEP |
| ??? | RM | HpyCRI2ORF2695P (66% identity) | HpyGCT85ORFDBP | |
| ??? | RM | HpyCOL108ORF3210P (24% identity) | HpyGCT85ORFDAP | |
| ??? | R | HpyPO108IP (95% identity) | CATG | HpyGCT85ORFCP |
| ??? | M | M.HpyCRI2I (100% identity) | CATG | M.HpyGCT85ORFCP |
| ??? | M | M.Hpyfe124ORF5400P (100% identity) | CTNAG | M.HpyGCT85ORFBP |
| ??? | R | HpyQ56ORFHP (96% identity) | CTNAG | HpyGCT85ORFBP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyK025ORF200P (94% identity) | M.HpyGCT85ORFMP | |
| ??? | R | HpyAR3XXIP (92% identity) | HpyGCT85ORFMP | |
| ??? | M | M.HpyK012ORF6550P (94% identity) | M.HpyGCT85ORFLP | |
| ??? | R | HpyGCT17ORFEP (92% identity) | HpyGCT85ORFLP | |
| ??? | R | HpySP318ORF7485P (47% identity) | GACC | HpyGCT85ORFYP |
| ??? | M | M.HpyK032ORF685P (93% identity) | GACC | M.HpyGCT85ORFYP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpySP203GmrSDP (83% identity) | HpyGCT85GmrSD2P | |
| ??? | R | HpySW05GmrSD2P (93% identity) | HpyGCT85GmrSDP | |