Edwardsiella ictaluri KH201010 |
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Putative Edwardsiella ictaluri KH201010 RM systems
Ref: Imajoh,M. and Kawahara,M. unpublished
REBASE ref # 36754
Complete sequence: 3,771,945 bp
GenBank #: AP028106
REBASE acronym: Eic1010
Org_num: 67172
All begin KH201010_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 194 aa hypothetical protein | |||
| 340 | R | EicYCHORF180P (100% identity) | Eic1010ORF350P | |
| 350 | M | M.EicYCHORF180P (100% identity) | M.Eic1010ORF350P | |
| 360 | S | S1.Eic921ORF350P (100% identity) | S1.Eic1010ORF350P | |
| 370 | IS256-like element ISSoEn2 family transposase | |||
| 380 | 77 aa hypothetical protein | |||
| 390 | IS256-like element ISSoEn2 family transposase | |||
| 400 | S | S2.EicYCHORF180P (100% identity) | S2.Eic1010ORF350P | |
| 410 | 328 aa hypothetical protein | |||
| 4820 | 140 aa hypothetical protein | |||
| 4830 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic1010ORF4830P |
| 4840 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic1010ORF4830P |
| 4850 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic1010ORF4830P |
| 4860 | 53 aa hypothetical protein | |||
| 9290 | 110 aa hypothetical protein | |||
| 9300 | M | M.EicT11ORF4795P (100% identity) | M.Eic1010ORF9300P | |
| 9310 | S | S.EicYCHORF4815P (100% identity) | S.Eic1010ORF9300P | |
| 9320 | R | EicT11ORF4795P (68% identity) | Eic1010ORF9300AP | |
| 9330 | R | EicT11ORF4795P (31% identity) | Eic1010ORF9300BP | |
| 9340 | 64 aa hypothetical protein | |||
| 22040 | NADH oxidoreductase | |||
| 22050 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic1010ORF22080P |
| 22060 | Fic family protein | |||
| 22070 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic1010ORF22080P |
| 22080 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic1010ORF22080P |
| 22090 | low-specificity L-threonine aldolase | |||
| 30110 | SprT family zinc-dependent metalloprotease | |||
| 30120 | R | EicYCHORF15685P (100% identity) | Eic1010ORF30160P | |
| 30130 | macro domain-containing protein | |||
| 30140 | DUF4433 domain-containing protein | |||
| 30150 | S | S.Eic921ORF30350P (100% identity) | S.Eic1010ORF30160P | |
| 30160 | M | M.EicYCHORF15685P (100% identity) | M.Eic1010ORF30160P | |
| 30170 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2540 | TIGR03747 family integrating conjugative element | |||
| 2550 | R | EicYCHORF1525P (100% identity) | Eic1010ORF2560P | |
| 2560 | M | M.EicYCHORF1525P (100% identity) | M.Eic1010ORF2560P | |
| 2570 | RAQPRD family integrative conjugative element | |||
| 13400 | 215 aa hypothetical protein | |||
| 13410 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic1010ORF13420P |
| 13420 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic1010ORF13420P |
| 13430 | V | V.EicYCHORF6960P (100% identity) | V.Eic1010ORF13420P | |
| 13440 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9330 | 343 aa hypothetical protein | |||
| ??? | R | EicYCHMcrBP (100% identity) | Eic1010McrBP | |
| 9360 | R | Eic921McrCP (100% identity) | Eic1010McrCP | |
| 9370 | 154 aa hypothetical protein | |||