Edwardsiella ictaluri KB20921 |
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Putative Edwardsiella ictaluri KB20921 RM systems
Ref: Imajoh,M. and Kawahara,M. unpublished
REBASE ref # 36754
Complete sequence: 3,771,942 bp
GenBank #: AP028102
REBASE acronym: Eic921
Org_num: 67171
All begin KB20921_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 194 aa hypothetical protein | |||
| 340 | R | EicYCHORF180P (100% identity) | Eic921ORF350P | |
| 350 | M | M.EicYCHORF180P (100% identity) | M.Eic921ORF350P | |
| 360 | S | S1.Eic906ORF350P (100% identity) | S1.Eic921ORF350P | |
| 370 | IS256-like element ISSoEn2 family transposase | |||
| 380 | IS256-like element ISSoEn2 family transposase | |||
| 390 | S | S2.EicYCHORF180P (100% identity) | S2.Eic921ORF350P | |
| 400 | 328 aa hypothetical protein | |||
| 4840 | 140 aa hypothetical protein | |||
| 4850 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic921ORF4850P |
| 4860 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic921ORF4850P |
| 4870 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic921ORF4850P |
| 4880 | 53 aa hypothetical protein | |||
| 9350 | 110 aa hypothetical protein | |||
| 9360 | M | M.EicT11ORF4795P (100% identity) | M.Eic921ORF9360P | |
| 9370 | S | S.EicYCHORF4815P (100% identity) | S.Eic921ORF9360P | |
| 9380 | R | EicT11ORF4795P (68% identity) | Eic921ORF9360AP | |
| 9390 | R | EicT11ORF4795P (31% identity) | Eic921ORF9360BP | |
| 9400 | 64 aa hypothetical protein | |||
| 22180 | NADH oxidoreductase | |||
| 22190 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic921ORF22220P |
| 22200 | Fic family protein | |||
| 22210 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic921ORF22220P |
| 22220 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic921ORF22220P |
| 22230 | low-specificity L-threonine aldolase | |||
| 30300 | SprT family zinc-dependent metalloprotease | |||
| 30310 | R | EicYCHORF15685P (100% identity) | Eic921ORF30350P | |
| 30320 | macro domain-containing protein | |||
| 30330 | DUF4433 domain-containing protein | |||
| 30340 | S | S.Eic906ORF30250P (100% identity) | S.Eic921ORF30350P | |
| 30350 | M | M.EicYCHORF15685P (100% identity) | M.Eic921ORF30350P | |
| 30360 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2550 | TIGR03747 family integrating conjugative element | |||
| 2560 | R | EicYCHORF1525P (100% identity) | Eic921ORF2570P | |
| 2570 | M | M.EicYCHORF1525P (100% identity) | M.Eic921ORF2570P | |
| 2580 | RAQPRD family integrative conjugative element | |||
| 13470 | 215 aa hypothetical protein | |||
| 13480 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic921ORF13490P |
| 13490 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic921ORF13490P |
| 13500 | V | V.EicYCHORF6960P (100% identity) | V.Eic921ORF13490P | |
| 13510 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9390 | 343 aa hypothetical protein | |||
| ??? | R | EicYCHMcrBP (100% identity) | Eic921McrBP | |
| 9420 | R | Eic906McrCP (100% identity) | Eic921McrCP | |
| 9430 | 154 aa hypothetical protein | |||