Escherichia coli 85.0412 |
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Putative Escherichia coli 85.0412 RM systems
Ref: Guragain,M. unpublished
REBASE ref # 36775
| Sequence length: | GenBank #: | |
| Chromosome: | 5,117,577 bp | CP122448 |
| plasmid p1: | 115,290 bp | CP122449 |
| plasmid p2: | 91,257 bp | CP122450 |
REBASE acronym: Eco412
Org_num: 67269
All begin QBY77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20770 | DUF262 domain-containing HNH endonuclease family | |||
| 20775 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco412ORF20780P |
| 20780 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco412ORF20780P |
| 20785 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco412ORF20780P |
| 20790 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1845 | cell division protein DamX | |||
| 1850 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco412DamP |
| 1855 | ribulose-phosphate 3-epimerase | |||
| 2445 | DUF2556 family protein | |||
| 2450 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco412ORF2450P |
| 2455 | DNA-binding transcriptional regulator Fis | |||
| 6560 | 106 aa hypothetical protein | |||
| 6565 | M | M.EcoA16ORF17890P (99% identity) | M.Eco412ORF6565P | |
| 6570 | VRR-NUC domain-containing protein | |||
| 7100 | DUF1382 family protein | |||
| 7105 | M | M.EspP049ORF3048P (99% identity) | M.Eco412ORF7105P | |
| 7110 | PerC family transcriptional regulator | |||
| 10350 | phosphohydrolase | |||
| 10355 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco412DcmP |
| 10360 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco412DcmP |
| 10365 | drug/metabolite exporter YedA | |||
| 20495 | phage holin, lambda family | |||
| 20500 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco412ORF20500P | |
| 20505 | 95 aa hypothetical protein | |||
| 20540 | LexA family transcriptional regulator | |||
| 20545 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco412ORF20545P |
| 20550 | PerC family transcriptional regulator | |||
| 20960 | HNH endonuclease | |||
| 20965 | R | Ecoi127aORF4076P (100% identity) | Eco412ORF20965P | |
| 20970 | peptidase | |||
| plasmid p1 | ||||
| 24985 | 103 aa hypothetical protein | |||
| 24990 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco412ORF24990P |
| 24995 | 73 aa hypothetical protein | |||
| plasmid p2 | ||||
| 25525 | 103 aa hypothetical protein | |||
| 25530 | M | M.Sen527ORF25750P (100% identity) | M.Eco412ORF25530P | |
| 25535 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20790 | endoribonuclease SymE | |||
| 20795 | R | EcoUTGmrSD2P (52% identity) | Eco412GmrSDP | |
| 20800 | DUF262 domain-containing protein | |||