Escherichia coli KSE-C30 |
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Putative Escherichia coli KSE-C30 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
Complete sequence: 4,731,747 bp
GenBank #: CP124988
REBASE acronym: EcoSEC30
Org_num: 67408
All begin QL148_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5405 | IS5-like element ISKpn26 family transposase | |||
| 5410 | R | Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | EcoSEC30ORF5420P |
| 5415 | S | S.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | S.EcoSEC30ORF5420P |
| 5420 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | M.EcoSEC30ORF5420P |
| 5425 | GTPase family protein | |||
| 9595 | 75 aa hypothetical protein | |||
| 9600 | R | EcosEC2ORF13930P (100% identity) | EcoSEC30ORF9610P | |
| 9605 | S | S.EcosEC2ORF13930P (100% identity) | S.EcoSEC30ORF9610P | |
| 9610 | M | M.EcosS1ORF17110P (100% identity) | M.EcoSEC30ORF9610P | |
| 9615 | GTPase family protein | |||
| 14970 | restriction system-associated AAA family ATPase | |||
| 14975 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoSEC30ORF14980P |
| 14980 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoSEC30ORF14980P |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14275 | replication endonuclease | |||
| 14280 | M | M.EcoWH333ORF4405P (100% identity) | TGGCCA | M.EcoSEC30ORF14280P |
| 14285 | AAA family ATPase | |||
| 14695 | drug/metabolite exporter YedA | |||
| 14700 | V | V.SflSTLE1DcmP (100% identity) | V.EcoSEC30DcmP | |
| 14705 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoSEC30DcmP |
| 14710 | phosphohydrolase | |||
| 21265 | tyrosine-type recombinase/integrase | |||
| 21270 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoSEC30ORF21270P |
| 21275 | DUF2556 family protein | |||
| 21890 | ribulose-phosphate 3-epimerase | |||
| 21895 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSEC30DamP |
| 21900 | cell division protein DamX | |||