Escherichia coli KFS-D24 |
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Putative Escherichia coli KFS-D24 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
| Sequence length: | GenBank #: | |
| Chromosome: | 5,001,596 bp | CP125013 |
| plasmid pKFS-D24_1: | 95,063 bp | CP125015 |
| plasmid pKFS-D24_2: | 90,924 bp | CP125014 |
REBASE acronym: EcoD24
Org_num: 67402
All begin QL134_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16995 | endoribonuclease SymE | |||
| 17000 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.EcoD24ORF17005P |
| 17005 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.EcoD24ORF17005P |
| 17010 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | EcoD24ORF17005P |
| 17015 | 322 aa hypothetical protein | |||
| plasmid pKFS-D24_2 | ||||
| 25000 | IS1-like element IS1A family transposase | |||
| 25005 | R | KpnKPH1ORF27575P (85% identity) | CAAYNNNNNCTGG | EcoD24ORF25005P |
| 25010 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.EcoD24ORF25005P |
| 25015 | IS1-like element IS1B family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3285 | drug/metabolite exporter YedA | |||
| 3290 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoD24DcmP |
| 3295 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoD24DcmP |
| 3300 | phosphohydrolase | |||
| 10700 | DNA-binding transcriptional regulator Fis | |||
| 10705 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.EcoD24ORF10705P |
| 10710 | DUF2556 family protein | |||
| 11300 | ribulose-phosphate 3-epimerase | |||
| 11305 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoD24DamP |
| 11310 | cell division protein DamX | |||
| 21645 | TraR/DksA family transcriptional regulator | |||
| 21650 | M | M.EcoEC0245ORF14995P (100% identity) | GATC | M.EcoD24ORF21650P |
| 21655 | replication endonuclease | |||
| plasmid pKFS-D24_1 | ||||
| 25175 | 103 aa hypothetical protein | |||
| 25180 | M | M.Sso80ORF24890P (100% identity) | M.EcoD24ORF25180P | |
| 25185 | 73 aa hypothetical protein | |||
| plasmid pKFS-D24_2 | ||||
| 24940 | 73 aa hypothetical protein | |||
| 24945 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoD24ORF24945P |
| 24950 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7095 | inovirus Gp2 family protein | |||
| 7100 | R | EcoNH21ORF3075P (100% identity) | EcoD24ORF7105P | |
| 7105 | M | M.EcoNH21ORF3075P (100% identity) | M.EcoD24ORF7105P | |
| 7110 | GTPase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16980 | 26 aa hypothetical protein | |||
| ??? | R | Ecos137GmrSDP (100% identity) | EcoD24GmrSDP | |
| 16995 | endoribonuclease SymE | |||