Escherichia coli ETEC1735 |
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Putative Escherichia coli ETEC1735 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,695,530 bp | CP122792 |
| plasmid unnamed2: | 5,650 bp | CP122794 |
| plasmid unnamed5: | 104,361 bp | CP122797 |
| plasmid unnamed7: | 94,251 bp | CP122799 |
REBASE acronym: EcoC1735
Org_num: 67350
All begin QDX85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3325 | transposase domain-containing protein | |||
| 3330 | M | M.EcoC1739ORF3335P (100% identity) | AGGNNNNNRTTG | M.EcoC1735ORF3330P |
| 3335 | AAA family ATPase | |||
| 3340 | S | S.EcoC1733ORF3330P (100% identity) | AGGNNNNNRTTG | S.EcoC1735ORF3330P |
| 3345 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | EcoC1735ORF3330P |
| 3350 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1615 | cell division protein DamX | |||
| 1620 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1735DamP |
| 1625 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.EcoC4072ORF14300P (100% identity) | ATGCAT | M.EcoC1735ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 6890 | recombination protein NinB | |||
| 6895 | M | M.SflFF36ORF6645P (100% identity) | GATC | M.EcoC1735ORF6895P |
| 6900 | NinE family protein | |||
| 9075 | HD domain-containing protein | |||
| 9080 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC1735DcmP |
| 9085 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC1735DcmP |
| 9090 | drug/metabolite exporter YedA | |||
| 11245 | DUF977 family protein | |||
| 11250 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC1735ORF11250P | |
| 11255 | 139 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 23080 | Rop family plasmid primer RNA-binding protein | |||
| 23085 | R | SenUA39ORF5P (100% identity) | GGYRCC | EcoC1735ORF23090P |
| 23090 | M | M.EcoH591ORF4942P (100% identity) | GGYRCC | M.EcoC1735ORF23090P |
| 23095 | MbeD family mobilization/exclusion protein | |||
| plasmid unnamed5 | ||||
| 23190 | 73 aa hypothetical protein | |||
| 23195 | M | M.EcoXJ61ORF24590P (100% identity) | M.EcoC1735ORF23195P | |
| 23200 | 103 aa hypothetical protein | |||
| plasmid unnamed7 | ||||
| 24395 | 73 aa hypothetical protein | |||
| 24400 | M | M.EcoSCU488ORF25195P (100% identity) | M.EcoC1735ORF24400P | |
| 24405 | 103 aa hypothetical protein | |||