Escherichia coli ETEC1723 |
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Putative Escherichia coli ETEC1723 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,708,961 bp | CP122852 |
| plasmid unnamed2: | 111,863 bp | CP122854 |
| plasmid unnamed6: | 130,392 bp | CP122858 |
REBASE acronym: EcoC1723
Org_num: 67343
All begin QDW93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3875 | 122 aa hypothetical protein | |||
| 3880 | R | EcoEC521ORF29600P (100% identity) | EcoC1723ORF3890P | |
| 3885 | S | S.EcoEC521ORF29600P (100% identity) | S.EcoC1723ORF3890P | |
| 3890 | M | M.EcoEC521ORF29600P (100% identity) | M.EcoC1723ORF3890P | |
| 3895 | GTPase family protein | |||
| 25115 | DUF262 domain-containing HNH endonuclease family | |||
| 25120 | R | EcoXH993ORF23720P (100% identity) | EcoC1723ORF25125P | |
| 25125 | M | M.EcoUM1887ORF20145P (100% identity) | M.EcoC1723ORF25125P | |
| 25130 | S | S.EcoC1745ORF22540P (100% identity) | S.EcoC1723ORF25125P | |
| 25135 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 375 | osmoprotectant transport activator ProQ | |||
| 380 | M | M.SflFF24DndBP (100% identity) | M.EcoC1723DndBP | |
| 385 | DNA phosphorothioation system sulfurtransferase | |||
| 380 | DNA sulfur modification protein DndB | |||
| 385 | M | M.SflFF24DndCP (100% identity) | M.EcoC1723DndCP | |
| 390 | DNA sulfur modification protein DndD | |||
| 385 | DNA phosphorothioation system sulfurtransferase | |||
| 390 | M | M.SflFF24DndDP (100% identity) | M.EcoC1723DndDP | |
| 395 | DNA sulfur modification protein DndE | |||
| 390 | DNA sulfur modification protein DndD | |||
| 395 | M | M.EcoEC0331DndEP (100% identity) | M.EcoC1723DndEP | |
| 400 | DNA phosphorothioation-associated DGQHR protein | |||
| 405 | 172 aa hypothetical protein | |||
| 410 | R | EcoC1744DptHP (100% identity) | EcoC1723DptHP | |
| 415 | DNA phosphorothioation-dependent restriction | |||
| 410 | DNA phosphorothioation-dependent restriction | |||
| 415 | R | SenLY67DptGP (100% identity) | EcoC1723DptGP | |
| 420 | DNA phosphorothioation-dependent restriction | |||
| 415 | DNA phosphorothioation-dependent restriction | |||
| 420 | R | SenLY67DptFP (100% identity) | EcoC1723DptFP | |
| 425 | integrase | |||
| 2020 | cell division protein DamX | |||
| 2025 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC1723DamP |
| 2030 | ribulose-phosphate 3-epimerase | |||
| 2645 | DUF2556 family protein | |||
| 2650 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC1723ORF2650P |
| 2655 | DNA-binding transcriptional regulator Fis | |||
| 6170 | adhesin-like autotransporter YpjA/EhaD | |||
| 6175 | R | SenB82ORF5360P (100% identity) | EcoC1723ORF6175P | |
| 6180 | primase-like DNA-binding domain-containing | |||
| 6360 | TrmB family transcriptional regulator | |||
| 6365 | M | M.EcoC1744ORF6450P (100% identity) | M.EcoC1723ORF6365P | |
| 6375 | 132 aa hypothetical protein | |||
| 6875 | Com family DNA-binding transcriptional | |||
| 6880 | M | M.SenYU39ORF1896P (100% identity) | M.EcoC1723ORF6880P | |
| 6885 | ribosome-associated translation inhibitor RaiA | |||
| 8110 | Com family DNA-binding transcriptional | |||
| 8115 | M | M.SenYU39ORF1896P (92% identity) | M.EcoC1723ORF8115P | |
| 8120 | ribosome-associated translation inhibitor RaiA | |||
| 12205 | phosphohydrolase | |||
| 12210 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC1723DcmP |
| 12215 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC1723DcmP |
| 12220 | drug/metabolite exporter YedA | |||
| 14480 | DUF977 family protein | |||
| 14485 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC1723ORF14485P | |
| 14490 | 60 aa hypothetical protein | |||
| 14600 | cold-shock protein | |||
| 14605 | M | M.SenYU39ORF1896P (100% identity) | M.EcoC1723ORF14605P | |
| 14610 | Com family DNA-binding transcriptional | |||
| 22890 | 132 aa hypothetical protein | |||
| 22900 | M | M.EcoC311ORF6085P (99% identity) | M.EcoC1723ORF22900P | |
| 22905 | TrmB family transcriptional regulator | |||
| 23255 | RusA family crossover junction | |||
| 23260 | M | M.EcoECO21ORF17780P (100% identity) | GATC | M.EcoC1723ORF23260P |
| 23265 | PerC family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 28930 | 73 aa hypothetical protein | |||
| 28935 | M | M.SspPIBORF23080P (100% identity) | M.EcoC1723ORF28935P | |
| 28940 | 101 aa hypothetical protein | |||
| plasmid unnamed6 | ||||
| 30915 | 73 aa hypothetical protein | |||
| 30920 | M | M.Ecocq9ORF29710P (100% identity) | M.EcoC1723ORF30920P | |
| 30925 | 103 aa hypothetical protein | |||