Escherichia coli ETEC4090 |
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Putative Escherichia coli ETEC4090 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,314,054 bp | CP122620 |
| plasmid unnamed2: | 120,673 bp | CP122622 |
| plasmid unnamed3: | 107,589 bp | CP122623 |
REBASE acronym: Eco4090
Org_num: 67379
All begin QDW69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17820 | GTPase family protein | |||
| 17825 | M | M.EcoC51ORF21285P (100% identity) | M.Eco4090ORF17825P | |
| 17830 | S | S.EcoC4072ORF24175P (66% identity) | S.Eco4090ORF17825P | |
| 17835 | R | EcoC51ORF21285P (98% identity) | Eco4090ORF17825P | |
| 17840 | 105 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1720 | cell division protein DamX | |||
| 1725 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4090DamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco4090ORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 6640 | serine/threonine protein phosphatase | |||
| 6645 | M | M.Eco48B2ORF17060P (100% identity) | M.Eco4090ORF6645P | |
| 6650 | PerC family transcriptional regulator | |||
| 15170 | drug/metabolite exporter YedA | |||
| 15175 | V | V.EcoP136DcmP (100% identity) | V.Eco4090DcmP | |
| 15180 | M | M.EcoP136DcmP (100% identity) | CCWGG | M.Eco4090DcmP |
| 15185 | phosphohydrolase | |||
| 21265 | 379 aa hypothetical protein | |||
| 21270 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco4090ORF21275P |
| 21275 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco4090ORF21275P |
| 21280 | 257 aa hypothetical protein | |||
| 21330 | phage lysis protein EssD | |||
| 21335 | M | M.Sso63633ORF22290P (100% identity) | M.Eco4090ORF21335P | |
| 21340 | TrmB family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 26935 | 103 aa hypothetical protein | |||
| 26940 | M | M.Ecocq9ORF29710P (100% identity) | M.Eco4090ORF26940P | |
| 26945 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 28140 | 101 aa hypothetical protein | |||
| 28145 | M | M.SspPIBORF23080P (100% identity) | M.Eco4090ORF28145P | |
| 28150 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23230 | GTPase | |||
| 23235 | R | Ssp28760MrrP (100% identity) | Eco4090MrrP | |
| 23240 | type I restriction-modification system | |||