Escherichia coli ETEC4073 |
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Putative Escherichia coli ETEC4073 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,785,434 bp | CP122660 |
| plasmid unnamed2: | 102,120 bp | CP122662 |
| plasmid unnamed4: | 67,952 bp | CP122664 |
| plasmid unnamed5: | 222,416 bp | CP122665 |
REBASE acronym: Eco4073
Org_num: 67371
All begin QDY26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13980 | 58 aa hypothetical protein | |||
| 13985 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco4073ORF13985P |
| 13990 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco4073ORF13985P |
| 13995 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 14000 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 14005 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | Eco4073ORF13985P |
| 14010 | SprT family zinc-dependent metalloprotease | |||
| plasmid unnamed4 | ||||
| 25020 | type II toxin-antitoxin system Phd/YefM family | |||
| 25025 | M | M.EcoC4072ORF24175P (100% identity) | M.Eco4073ORF25025P | |
| 25030 | S | S.EcoC4072ORF24175P (100% identity) | S.Eco4073ORF25025P | |
| 25035 | R | Eco1701ORF25470P (100% identity) | Eco4073ORF25025P | |
| 25040 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4073DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco4073ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 9100 | phosphohydrolase | |||
| 9105 | M | M.EcoP136DcmP (100% identity) | CCWGG | M.Eco4073DcmP |
| 9110 | V | V.EcoP136DcmP (100% identity) | V.Eco4073DcmP | |
| 9115 | drug/metabolite exporter YedA | |||
| 11085 | DUF977 family protein | |||
| 11090 | M | M.EcoC4072ORF23345P (100% identity) | M.Eco4073ORF11090P | |
| 11095 | 139 aa hypothetical protein | |||
| 12705 | Shiga toxin Stx2e subunit A | |||
| 12725 | M | M.Ecocq9ORF19465P (100% identity) | M.Eco4073ORF12725P | |
| 12730 | TrmB family transcriptional regulator | |||
| 14515 | 92 aa hypothetical protein | |||
| 14520 | M | M.EcoW26ORF35400P (100% identity) | M.Eco4073ORF14520P | |
| 14525 | TrmB family transcriptional regulator | |||
| 18295 | 379 aa hypothetical protein | |||
| 18300 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco4073ORF18305P |
| 18305 | M | M.EcoC4072ORF6775P (100% identity) | M.Eco4073ORF18305P | |
| 18310 | 257 aa hypothetical protein | |||
| 18360 | phage lysis protein EssD | |||
| 18365 | M | M.Eco1706ORF18965P (100% identity) | M.Eco4073ORF18365P | |
| 18370 | TrmB family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 24445 | 103 aa hypothetical protein | |||
| 24450 | M | M.StyR64ORFAP (100% identity) | M.Eco4073ORF24450P | |
| 24455 | 73 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 25430 | thermonuclease family protein | |||
| 25435 | M | M.SenZC055ORF26240P (100% identity) | CCWGG | M.Eco4073ORF25435P |
| 25440 | 55 aa hypothetical protein | |||
| 25865 | 273 aa hypothetical protein | |||
| 25870 | M | M1.SenF8025ORFBP (100% identity) | M.Eco4073ORF25870P | |
| 25875 | DNA-binding protein | |||
| 25990 | 203 aa hypothetical protein | |||
| 25995 | M | M.SenF8025ORFAP (86% identity) | M.Eco4073ORF25995P | |
| 26000 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20220 | GTPase | |||
| 20225 | R | Ssp28760MrrP (100% identity) | Eco4073MrrP | |
| 20230 | type I restriction-modification system | |||