Escherichia coli ETEC4067 |
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Putative Escherichia coli ETEC4067 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,096,799 bp | CP122685 |
| plasmid unnamed1: | 67,634 bp | CP122686 |
| plasmid unnamed2: | 93,031 bp | CP122687 |
REBASE acronym: Eco4067
Org_num: 67365
All begin QDX30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5790 | IS1 family transposase | |||
| 5795 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco4067ORF5805P |
| 5800 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco4067ORF5805P |
| 5805 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco4067ORF5805P |
| 5810 | integrase core domain-containing protein | |||
| 15310 | GTPase family protein | |||
| 15315 | M | M.EcoW1316ORF930P (100% identity) | M.Eco4067ORF15315P | |
| 15320 | S | S.EcoW1316ORF930P (100% identity) | S.Eco4067ORF15315P | |
| 15325 | R | EcoW1316ORF930P (100% identity) | Eco4067ORF15315P | |
| 15330 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1770 | cell division protein DamX | |||
| 1775 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4067DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.EcoW1316ORF13330P (99% identity) | ATGCAT | M.Eco4067ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 6440 | DUF1382 family protein | |||
| 6445 | M | M.SspPIBORF6330P (100% identity) | GATC | M.Eco4067ORF6445P |
| 6450 | PerC family transcriptional regulator | |||
| 9950 | phosphohydrolase | |||
| 9955 | M | M.EcoW1316DcmP (100% identity) | CCWGG | M.Eco4067DcmP |
| 9960 | V | V.EcoW1316DcmP (100% identity) | V.Eco4067DcmP | |
| 9965 | drug/metabolite exporter YedA | |||
| 12070 | DUF977 family protein | |||
| 12075 | M | M.EcoC4071ORF12110P (100% identity) | M.Eco4067ORF12075P | |
| 12080 | 139 aa hypothetical protein | |||
| 14030 | Shiga toxin Stx2e subunit A | |||
| 14050 | M | M.EcoW1316ORF2195P (100% identity) | M.Eco4067ORF14050P | |
| 14055 | TrmB family transcriptional regulator | |||
| 15740 | 92 aa hypothetical protein | |||
| 15745 | M | M.EcoW26ORF35400P (100% identity) | M.Eco4067ORF15745P | |
| 15750 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 25315 | 103 aa hypothetical protein | |||
| 25320 | M | M.Ecocq9ORF29710P (100% identity) | M.Eco4067ORF25320P | |
| 25325 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25870 | 103 aa hypothetical protein | |||
| 25875 | M | M.SspPIBORF23080P (100% identity) | M.Eco4067ORF25875P | |
| 25880 | 73 aa hypothetical protein | |||