Escherichia coli ETEC1747 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ETEC1747 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,240,928 bp | CP122722 |
| plasmid unnamed1: | 91,206 bp | CP122723 |
| plasmid unnamed2: | 130,771 bp | CP122724 |
REBASE acronym: EcoC1747
Org_num: 67359
All begin QDW91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14995 | SprT family zinc-dependent metalloprotease | |||
| 15000 | R | Eco83906ORF4824P (99% identity) | EcoC1747ORF15015P | |
| 15005 | restriction endonuclease subunit S | |||
| 15010 | restriction endonuclease subunit S | |||
| 15015 | M | M.EcoSTEC346ORFGP (100% identity) | M.EcoC1747ORF15015P | |
| 15020 | 380 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1747DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2420 | DUF2556 family protein | |||
| 2425 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC1747ORF2425P |
| 2430 | DNA-binding transcriptional regulator Fis | |||
| 4175 | type I restriction-modification system subunit M | |||
| 4180 | RM | Efe41C23ORF15565P (100% identity) | CTGAAG | EcoC1747ORF4185P |
| 4185 | M | M.Eco91022ORFDP (100% identity) | CTGAAG | M.EcoC1747ORF4185P |
| 4190 | 62 aa hypothetical protein | |||
| 6925 | serine/threonine protein phosphatase | |||
| 6930 | M | M.EcoW25KORF3575P (99% identity) | M.EcoC1747ORF6930P | |
| 6935 | PerC family transcriptional regulator | |||
| 9760 | recombination protein NinB | |||
| 9765 | M | M.SflN97ORF15810P (99% identity) | GATC | M.EcoC1747ORF9765P |
| 9770 | NinE family protein | |||
| 15310 | drug/metabolite exporter YedA | |||
| 15315 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC1747DcmP |
| 15320 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC1747DcmP |
| 15325 | HD domain-containing protein | |||
| 15605 | DUF1317 family protein | |||
| 15610 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoC1747ORF15610P |
| 15615 | cell division protein ZapA | |||
| 20700 | BREX-1 system phosphatase PglZ type A | |||
| 20705 | RM | EcosW25KORF12230P (100% identity) | EcoC1747ORF20705P | |
| 20710 | BREX system P-loop protein BrxC | |||
| 22990 | LacI family DNA-binding transcriptional | |||
| 22995 | M | M.EcoC1731SspBP (98% identity) | M.EcoC1747SspBP | |
| 23000 | M | M.EcoC1731SspCP (100% identity) | M.EcoC1747SspCP | |
| 23005 | M | M.EcoC1731SspDP (100% identity) | M.EcoC1747SspDP | |
| 23010 | 614 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 26370 | 103 aa hypothetical protein | |||
| 26375 | M | M.SspPIBORF23080P (100% identity) | M.EcoC1747ORF26375P | |
| 26380 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27260 | 73 aa hypothetical protein | |||
| 27265 | M | M.Ecocq9ORF29710P (100% identity) | M.EcoC1747ORF27265P | |
| 27270 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4160 | IS3 family transposase | |||
| 4165 | R | Eco91022McrBP (100% identity) | EcoC1747McrB2P | |
| 4170 | R | EcoC9969McrCP (100% identity) | EcoC1747McrC2P | |
| 4175 | type I restriction-modification system subunit M | |||
| 10625 | recombinase family protein | |||
| 10630 | R | EcoteDMcrBP (100% identity) | EcoC1747McrBP | |
| 10635 | R | EmaE2C08McrCP (100% identity) | EcoC1747McrCP | |
| 10640 | isocitrate/isopropylmalate family dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6140 | TraR/DksA family transcriptional regulator | |||
| 6145 | M | M.EcoTX1999ORF3129P (100% identity) | GATC | M.EcoC1747ORF6145P |
| 6150 | replication endonuclease | |||