Microbulbifer species VAAF005 |
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Putative Microbulbifer species VAAF005 RM systems
Ref: Zhong,W. et al. Chembiochem, e202300190 (2023) In press
REBASE ref # 36818
Complete sequence: 5,397,540 bp
GenBank #: CP120233
REBASE acronym: Msp05
Org_num: 67518
All begin P0078_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11535 | helix-turn-helix domain-containing protein | |||
| 11540 | S | S2.AspA2M4ORF7815P (31% identity) | S.Msp05ORF11545P | |
| 11545 | M | M.VcuS5ORF8260P (72% identity) | M.Msp05ORF11545P | |
| 11550 | 51 aa hypothetical protein | |||
| 17950 | 313 aa hypothetical protein | |||
| 17955 | S | S.Eco23C03ORF19325P (44% identity) | S.Msp05ORF17960P | |
| 17960 | M | M.DzeORF3672P (74% identity) | M.Msp05ORF17960P | |
| 17965 | Fic/DOC family N-terminal domain-containing | |||
| 17970 | R | Mce12973ORF16315P (72% identity) | Msp05ORF17960P | |
| 17975 | C-terminal helicase domain-containing protein | |||
| 23870 | patatin-like phospholipase family protein | |||
| 23875 | S | S2.Msp07ORF17650P (95% identity) | S2.Msp05ORF23910P | |
| 23880 | R | Msp03ORF13945P (93% identity) | Msp05ORF23910P | |
| 23885 | McrC family protein | |||
| 23890 | AAA family ATPase | |||
| 23895 | 264 aa hypothetical protein | |||
| 23900 | UPF0149 family protein | |||
| 23905 | S | S.MspGL2ORF31810P (66% identity) | S1.Msp05ORF23910P | |
| 23910 | M | M.Msp03ORF13945P (98% identity) | M.Msp05ORF23910P | |
| 23915 | 101 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12885 | helix-turn-helix domain-containing protein | |||
| 12890 | M | M.MspMM1ORF1061P (82% identity) | M.Msp05ORF12890P | |
| 12895 | R | HspSMJS2ORF13445P (42% identity) | Msp05ORF12890P | |
| 12900 | IS630 family transposase | |||
| 12905 | 85 aa hypothetical protein | |||
| 12910 | V | V.MspMM1ORF1061P (56% identity) | V.Msp05ORF12890P | |
| 12915 | 476 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23880 | type I restriction endonuclease subunit R | |||
| 23885 | R | Msp03McrCP (94% identity) | Msp05McrCP | |
| 23890 | R | Msp03McrBP (68% identity) | Msp05McrBP | |
| 23895 | 264 aa hypothetical protein | |||