Escherichia coli ETEC1701 |
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Putative Escherichia coli ETEC1701 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,087,502 bp | CP122938 |
| plasmid unnamed3: | 96,600 bp | CP122941 |
| plasmid unnamed5: | 69,294 bp | CP122943 |
REBASE acronym: Eco1701
Org_num: 67331
All begin QDX07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5605 | IS1 family transposase | |||
| 5610 | R | Sen12509ORF5865P (79% identity) | ACAYNNNNCTG | Eco1701ORF5620P |
| 5615 | S | S.Eco410ORF14655P (100% identity) | ACAYNNNNCTG | S.Eco1701ORF5620P |
| 5620 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco1701ORF5620P |
| 5625 | integrase core domain-containing protein | |||
| 14945 | GTPase family protein | |||
| 14950 | M | M.EcoW1316ORF930P (100% identity) | M.Eco1701ORF14950P | |
| 14955 | S | S.EcoW1316ORF930P (100% identity) | S.Eco1701ORF14950P | |
| 14960 | R | EcoW1316ORF930P (99% identity) | Eco1701ORF14950P | |
| 14965 | IS5-like element ISKpn26 family transposase | |||
| plasmid unnamed3 | ||||
| 25465 | type II toxin-antitoxin system Phd/YefM family | |||
| 25470 | M | M.EcoP136ORF28155P (100% identity) | M.Eco1701ORF25470P | |
| 25475 | S | S.EcoH238ORFAP (50% identity) | S1.Eco1701ORF25470P | |
| 25480 | IS3 family transposase | |||
| 25485 | S | S.EcoP136ORF28155P (34% identity) | S2.Eco1701ORF25470P | |
| 25490 | R | Eco4073ORF25025P (100% identity) | Eco1701ORF25470P | |
| 25495 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1701DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.EcoW1316ORF13330P (100% identity) | ATGCAT | M.Eco1701ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 9520 | phosphohydrolase | |||
| 9525 | M | M.EcoW1316DcmP (100% identity) | CCWGG | M.Eco1701DcmP |
| 9530 | V | V.EcoW1316DcmP (100% identity) | V.Eco1701DcmP | |
| 9535 | drug/metabolite exporter YedA | |||
| 11660 | DUF977 family protein | |||
| 11665 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco1701ORF11665P | |
| 11670 | 139 aa hypothetical protein | |||
| 13670 | Shiga toxin Stx2e subunit A | |||
| 13690 | M | M.EcoW1316ORF2195P (100% identity) | M.Eco1701ORF13690P | |
| 13695 | TrmB family transcriptional regulator | |||
| 15365 | 92 aa hypothetical protein | |||
| 15370 | M | M.EcoW26ORF35400P (100% identity) | M.Eco1701ORF15370P | |
| 15375 | TrmB family transcriptional regulator | |||
| plasmid unnamed3 | ||||
| 25585 | TerB family tellurite resistance protein | |||
| 25600 | M | M.EcoE1728ORF24505P (98% identity) | M.Eco1701ORF25600P | |
| 25605 | recombination-associated protein RdgC | |||
| plasmid unnamed5 | ||||
| 26105 | 101 aa hypothetical protein | |||
| 26110 | M | M.SflFF87ORF23240P (100% identity) | M.Eco1701ORF26110P | |
| 26115 | 73 aa hypothetical protein | |||