Escherichia coli AVS0753 |
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Putative Escherichia coli AVS0753 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,285,675 bp | CP124332 |
| plasmid pAVS0753-A: | 105,993 bp | CP124333 |
REBASE acronym: EcoS0753
Org_num: 67312
All begin QJP82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18535 | endoribonuclease SymE | |||
| 18540 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0753ORF18550P |
| 18545 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0753ORF18550P |
| 18550 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0753ORF18550P |
| 18555 | restriction endonuclease | |||
| 20350 | ash family protein | |||
| 20355 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0753ORF20360P |
| 20360 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0753ORF20360P |
| 20365 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0753ORF20360P |
| 20370 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2920 | TrmB family transcriptional regulator | |||
| 2925 | R | R1.EcosS3ORF2905P (100% identity) | GTCGAC | R1.EcoS0753ORF2935P |
| 2930 | R | R2.EcosS3ORF2905P (100% identity) | GTCGAC | R2.EcoS0753ORF2935P |
| 2935 | M | M2.EcosS3ORF2905P (100% identity) | GTCGAC | M.EcoS0753ORF2935P |
| 2940 | antiterminator Q family protein | |||
| 3810 | drug/metabolite exporter YedA | |||
| 3815 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0753DcmP |
| 3820 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0753DcmP |
| 3825 | phosphohydrolase | |||
| 7855 | 121 aa hypothetical protein | |||
| 7860 | R | Sso8033ORF3755P (99% identity) | CCWGG | EcoS0753ORF7865P |
| 7865 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.EcoS0753ORF7865P |
| 7870 | 257 aa hypothetical protein | |||
| 7995 | phage lysis protein EssD | |||
| 8000 | M | M.EcosR6ORF7985P (100% identity) | M.EcoS0753ORF8000P | |
| 8005 | 95 aa hypothetical protein | |||
| 8040 | LexA family transcriptional regulator | |||
| 8045 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoS0753ORF8045P |
| 8050 | PerC family transcriptional regulator | |||
| 11840 | DNA-binding transcriptional regulator Fis | |||
| 11845 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0753ORF11845P |
| 11850 | DUF2556 family protein | |||
| 12440 | ribulose-phosphate 3-epimerase | |||
| 12445 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0753DamP |
| 12450 | cell division protein DamX | |||
| 16890 | conjugal transfer protein TraG N-terminal | |||
| 16895 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0753ORF16895P | |
| 16900 | R | EcosS3ORF15775P (100% identity) | EcoS0753ORF16895P | |
| 16905 | response regulator receiver domain | |||
| 18185 | helix-turn-helix domain-containing protein | |||
| 18190 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0753ORF18190P |
| 18195 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0753ORF18190P |
| 18200 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0753ORF18190P |
| 18205 | McrC family protein | |||
| 23840 | 71 aa hypothetical protein | |||
| 23845 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0753ORF23845P | |
| 23850 | helix-turn-helix transcriptional regulator | |||
| plasmid pAVS0753-A | ||||
| 26740 | 73 aa hypothetical protein | |||
| 26745 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoS0753ORF26745P | |
| 26750 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18200 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 18205 | R | EcosS9McrCP (100% identity) | EcoS0753McrCP | |
| 18210 | R | EcosS3McrBP (100% identity) | EcoS0753McrBP | |
| 18215 | glycosyltransferase | |||
| 18550 | class I SAM-dependent DNA methyltransferase | |||
| 18555 | R | Ecou021MrrP (100% identity) | EcoS0753MrrP | |
| 18560 | BrnT family toxin | |||