Pseudomonas aeruginosa 2021CK-01162 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa 2021CK-01162 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 7,290,539 bp | CP124632 |
| plasmid unnamed1: | 82,465 bp | CP124633 |
REBASE acronym: Pae1162
Org_num: 67555
All begin P7I87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | site-specific integrase | |||
| 1690 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae1162ORF1690P |
| 1695 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae1162ORF1690P |
| 1700 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae1162ORF1690P |
| 1705 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae1162ORF1690P | |
| 1710 | 196 aa hypothetical protein | |||
| 3145 | helix-turn-helix domain-containing protein | |||
| 3150 | R | PaeMF1ORF1540P (99% identity) | Pae1162ORF3160P | |
| 3155 | DNA recombination protein RmuC | |||
| 3160 | M | M.Pfl13852ORFAP (100% identity) | M.Pae1162ORF3160P | |
| 3165 | S | S.Pfl13852ORFAP (100% identity) | S1.Pae1162ORF3160P | |
| 3170 | 48 aa hypothetical protein | |||
| 14360 | DNA-processing protein DprA | |||
| 14365 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae1162ORF14365P | |
| 14370 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae1162ORF14365P | |
| 14375 | S | S.Pae973ORF12590P (100% identity) | S.Pae1162ORF14365P | |
| 14380 | R | Pae973ORF12590P (100% identity) | Pae1162ORF14365P | |
| 14385 | AAA family ATPase | |||
| 26845 | IS3 family transposase | |||
| 26850 | R | PaeMF1ORF24740P (100% identity) | Pae1162ORF26875P | |
| 26855 | 50 aa hypothetical protein | |||
| 26860 | 166 aa hypothetical protein | |||
| 26865 | AAA family ATPase | |||
| 26870 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae1162ORF26875P | |
| 26875 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae1162ORF26875P | |
| 26880 | helix-turn-helix domain-containing protein | |||
| 34275 | endonuclease NucS | |||
| 34280 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae1162ORF34285P |
| 34285 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae1162ORF34285P |
| 34290 | HNH endonuclease signature motif containing | |||
| 34295 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae1162ORF34285P |
| 34300 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2915 | 94 aa hypothetical protein | |||
| 2920 | M | M.PaesS1ORF1335P (100% identity) | M.Pae1162ORF2920P | |
| 2925 | V | V.PaesS1ORF1335P (100% identity) | V.Pae1162ORF2920P | |
| 2930 | DISARM system phospholipase D-like protein DrmC | |||
| 2945 | 424 aa hypothetical protein | |||
| 2950 | RM | PaesS1ORF1360P (67% identity) | Pae1162ORF2950P | |
| 2955 | DISARM system SNF2-like helicase DrmD | |||
| 8475 | DUF4406 domain-containing protein | |||
| 8480 | M | M.Pae61ORF32150P (100% identity) | M.Pae1162ORF8480P | |
| 8485 | 100 aa hypothetical protein | |||
| 13755 | 213 aa hypothetical protein | |||
| 13760 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae1162ORF13760P | |
| 13765 | 79 aa hypothetical protein | |||
| 18110 | Arc family DNA-binding protein | |||
| 18115 | M | M.PaepUM505ORFAP (100% identity) | M.Pae1162ORF29240P | |
| 18120 | nucleoid-associated protein YejK | |||
| 33490 | 83 aa hypothetical protein | |||
| 33495 | M | M.PaeTBCFORFBP (89% identity) | M.Pae1162ORF33495P | |
| 33500 | phosphoadenosine phosphosulfate reductase family | |||
| plasmid unnamed1 | ||||
| 35165 | Arc family DNA-binding protein | |||
| 35170 | M | M.PaepUM505ORFAP (100% identity) | M.Pae1162ORF35170P | |
| 35175 | nucleoid-associated protein YejK | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14380 | HsdR family type I site-specific | |||
| 14385 | R | Pae973McrBP (100% identity) | Pae1162McrBP | |
| 14390 | R | Pae973McrCP (100% identity) | Pae1162McrCP | |
| 14395 | 166 aa hypothetical protein | |||