Escherichia coli O157:H7 EDL933 |
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Putative Escherichia coli O157:H7 EDL933 RM systems
Ref: Xu,Z. unpublished
REBASE ref # 26838
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,920 bp | CP124740 |
| plasmid unnamed1: | 212,414 bp | CP124742 |
| plasmid unnamed2: | 286,775 bp | CP124741 |
| plasmid unnamed3: | 136,590 bp | CP124743 |
REBASE acronym: EcoDL933
Org_num: 67416
All begin QI555_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10020 | DUF262 domain-containing protein | |||
| 10025 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoDL933ORF10030P |
| 10030 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDL933ORF10030P |
| 10035 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoDL933ORF10030P |
| 10040 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 855 | 35 aa hypothetical protein | |||
| 860 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoDL933ORF860P | |
| 865 | 329 aa hypothetical protein | |||
| 870 | R | Ecos15739ORF2910P (100% identity) | EcoDL933ORF860P | |
| 875 | DUF1367 family protein | |||
| 2395 | DUF1737 domain-containing protein | |||
| 2410 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoDL933ORF2410P | |
| 2415 | TrmB family transcriptional regulator | |||
| 10260 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDL933ORF10260P |
| 10265 | DEAD/DEAH box helicase | |||
| 10295 | N-acetylneuraminic acid mutarotase | |||
| 10300 | R | Ecos1613ORF26795P (100% identity) | EcoDL933ORF10300P | |
| 10305 | transposase | |||
| 15410 | cell division protein DamX | |||
| 15415 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDL933DamP |
| 15420 | ribulose-phosphate 3-epimerase | |||
| 15925 | DUF2556 family protein | |||
| 15930 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDL933ORF15930P |
| 15935 | DNA-binding transcriptional regulator Fis | |||
| 21880 | recombination protein NinB | |||
| 21885 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoDL933ORF21885P |
| 21890 | NinE family protein | |||
| plasmid unnamed3 | ||||
| 29030 | 101 aa hypothetical protein | |||
| 29035 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoDL933ORF29035P | |
| 29040 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10040 | endoribonuclease SymE | |||
| 10045 | R | EcosPA8GmrSDP (55% identity) | EcoDL933GmrDP | |
| 10050 | R | Ecos1613GmrSP (100% identity) | EcoDL933GmrSP | |
| 10055 | cytoplasmic protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 27385 | NinE family protein | |||
| 27390 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoDL933ORF27390P |
| 27395 | recombination protein NinB | |||
| 27830 | NinE family protein | |||
| 27835 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoDL933ORF27835P |
| 27840 | recombination protein NinB | |||
| plasmid unnamed2 | ||||
| 26315 | recombination protein NinB | |||
| 26320 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoDL933ORF26320P |
| 26325 | NinE family protein | |||