Xylella fastidiosa subsp. pauca ALM4 |
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Putative Xylella fastidiosa subsp. pauca ALM4 RM systems
Ref: Fernandez,F.D. et al. unpublished
REBASE ref # 36882
Complete sequence: 2,579,484 bp
GenBank #: CP114549
REBASE acronym: Xfa4
Org_num: 67749
All begin O4444_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1195 | bifunctional aconitate hydratase | |||
| 1210 | R | XfaAM2ORF1240P (100% identity) | Xfa4ORF1225P | |
| 1215 | 105 aa hypothetical protein | |||
| 1220 | S | S.XfaAM2ORF1240P (100% identity) | S.Xfa4ORF1225P | |
| ??? | M | M.XfaFb7ORF8270P (99% identity) | M.Xfa4ORF1225P | |
| 1235 | helix-turn-helix transcriptional regulator | |||
| 11285 | 59 aa hypothetical protein | |||
| 11290 | R | XfaXf32ORF12315P (99% identity) | Xfa4ORF11300P | |
| 11295 | S | S.XfaORF2723P (99% identity) | S.Xfa4ORF11300P | |
| 11300 | M | M.XfaFb7ORF9875P (99% identity) | M.Xfa4ORF11300P | |
| 11305 | HNH endonuclease family protein | |||
| 11305 | HNH endonuclease family protein | |||
| 11310 | R | XfaFb7ORF9900P (100% identity) | Xfa4ORF11325P | |
| 11315 | S | S.XfaFb7ORF9900P (100% identity) | S.Xfa4ORF11325P | |
| 11320 | 42 aa hypothetical protein | |||
| 11325 | M | M.XfaFb7ORF9900P (99% identity) | M.Xfa4ORF11325P | |
| 11330 | LysE family translocator | |||
| 11375 | 149 aa hypothetical protein | |||
| 11380 | R | XfaFb7ORF9970P (100% identity) | Xfa4ORF11395P | |
| 11385 | 210 aa hypothetical protein | |||
| 11390 | S | S.XfaORF2742P (99% identity) | S.Xfa4ORF11395P | |
| 11395 | M | M.Xfa12ORF12655P (100% identity) | M.Xfa4ORF11395P | |
| 11400 | 74 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2375 | 68 aa hypothetical protein | |||
| 2380 | R | XfaXf32ORF2530P (100% identity) | CGTACG | Xfa4ORF2385P |
| 2385 | M | M.XfaXf32ORF2530P (100% identity) | CGTACG | M.Xfa4ORF2385P |
| 2395 | FKBP-type peptidyl-prolyl cis-trans isomerase | |||
| 3335 | low molecular weight phosphotyrosine protein | |||
| 3340 | M | M.XfaPr8ORF3585P (100% identity) | M.Xfa4ORF3340P | |
| 3345 | 71 aa hypothetical protein | |||
| 5830 | 115 aa hypothetical protein | |||
| 5835 | M | M.XfaXf6cORF5915P (100% identity) | GCATGC | M.Xfa4ORF5835P |
| 5840 | Ax21 family protein | |||
| 6000 | group II intron reverse transcriptase/maturase | |||
| 6005 | M | M.XfaORF1774P (78% identity) | M.Xfa4ORF6005P | |
| 6010 | 185 aa hypothetical protein | |||
| 9340 | outer membrane protein assembly factor BamD | |||
| 9345 | R | XfaPr8ORF9980P (100% identity) | Xfa4ORF9350P | |
| 9350 | M | M.XfaXf6cORF10320P (100% identity) | M.Xfa4ORF9350P | |
| 9355 | 83 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4605 | 3-oxoacyl-ACP synthase III | |||
| 4610 | M | M.XfaXf32ORF5190P (99% identity) | M.Xfa4ORF4610P | |
| 4615 | R | XfaXf32ORF5190P (100% identity) | Xfa4ORF4610P | |
| 4620 | alpha/beta fold hydrolase | |||