Escherichia marmotae YF8 |
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Putative Escherichia marmotae YF8 RM systems
Ref: Ramachandra,D.C. et al. unpublished
REBASE ref # 36778
| Sequence length: | GenBank #: | |
| Chromosome: | 4,559,072 bp | CP072689 |
| plasmid unnamed1: | 110,685 bp | CP072690 |
REBASE acronym: EmaYF8
Org_num: 67421
All begin J8I93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2775 | endoribonuclease SymE | |||
| 2780 | S | S.Ema8131ORF10040P (90% identity) | S.EmaYF8ORF2785P | |
| 2785 | M | M.Ema8131ORF10040P (100% identity) | M.EmaYF8ORF2785P | |
| 2790 | R | Ema8131ORF10040P (100% identity) | EmaYF8ORF2785P | |
| 2795 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1830 | BREX-1 system phosphatase PglZ type A | |||
| 1835 | RM | Ema8131ORF11015P (100% identity) | EmaYF8ORF1835P | |
| 1840 | BREX system P-loop protein BrxC | |||
| 12410 | NinE family protein | |||
| 12415 | M | M.Ema8131ORF265P (100% identity) | GATC | M.EmaYF8ORF12415P |
| 12420 | recombination protein NinB | |||
| 12665 | drug/metabolite exporter YedA | |||
| 12670 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EmaYF8DcmP |
| 12675 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EmaYF8DcmP |
| 12680 | phosphohydrolase | |||
| 18855 | DNA-binding transcriptional regulator Fis | |||
| 18860 | M | M.Esp9308ORFJP (100% identity) | ATGCAT | M.EmaYF8ORF18860P |
| 18865 | DUF2556 family protein | |||
| plasmid unnamed1 | ||||
| 22000 | 76 aa hypothetical protein | |||
| 22005 | M | M.Sso8361ORFCP (100% identity) | GATC | M.EmaYF8ORF22005P |
| 22010 | 269 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2765 | R | EmaC09McrCP (100% identity) | EmaYF8McrCP | |
| 2770 | R | EmaC09McrBP (100% identity) | EmaYF8McrBP | |
| 2775 | endoribonuclease SymE | |||
| 2790 | type I restriction-modification system | |||
| 2795 | R | EmaC09MrrP (100% identity) | EmaYF8MrrP | |
| 2800 | GTPase | |||