Pseudanabaena galeata CCNP1313 |
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Putative Pseudanabaena galeata CCNP1313 RM systems
Ref: Grabski,M.Z. et al. unpublished
REBASE ref # 36703
| Sequence length: | GenBank #: | |
| Chromosome: | 4,928,719 bp | CP112874 |
| plasmid pPg_01: | 225,631 bp | CP112875 |
| plasmid pPg_02: | 216,652 bp | CP112876 |
| plasmid pPg_03: | 174,751 bp | CP112877 |
| plasmid pPg_04: | 151,263 bp | CP112878 |
REBASE acronym: Pga1313
Org_num: 67064
All begin OA858_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4735 | C-3,4 desaturase CrtD | |||
| 4740 | M | M.GliD10ORF818P (47% identity) | M.Pga1313ORF4740P | |
| 4745 | Fic family protein | |||
| 4750 | 125 aa hypothetical protein | |||
| 4755 | S | S.GliD10ORF818P (60% identity) | S1.Pga1313ORF4740P | |
| 4760 | S | S2.Spe19205IIIP (68% identity) | S2.Pga1313ORF4740P | |
| 4765 | type II toxin-antitoxin system HigB family | |||
| 4770 | helix-turn-helix domain-containing protein | |||
| 4775 | R | Pho1027ORF6980P (50% identity) | Pga1313ORF4740AP | |
| 4780 | R | Pho1027ORF6980P (40% identity) | Pga1313ORF4740BP | |
| 4785 | efflux RND transporter periplasmic adaptor | |||
| 18240 | mechanosensitive ion channel family protein | |||
| 18245 | S | S.Acy7122ORF585P (41% identity) | S.Pga1313ORF18270P | |
| 18250 | DUF4351 domain-containing protein | |||
| 18255 | Rpn family recombination-promoting | |||
| 18260 | R | NcyWK1ORF2087P (58% identity) | Pga1313ORF18270P | |
| 18265 | transposase | |||
| 18270 | M | M.Msp211ORF31465P (54% identity) | M.Pga1313ORF18270P | |
| 18275 | pentapeptide repeat-containing protein | |||
| plasmid pPg_02 | ||||
| 24445 | zinc ribbon domain-containing protein | |||
| 24450 | S | S.Rsp17307ORF4870P (47% identity) | S.Pga1313ORF24450P | |
| 24455 | DUF5615 family PIN-like protein | |||
| 24460 | DUF433 domain-containing protein | |||
| 24465 | R | PyaNHR1IIP (61% identity) | Pga1313ORF24450P | |
| 24470 | 59 aa hypothetical protein | |||
| 24535 | ParA family protein | |||
| 24540 | R | MspWCC4ORF3445P (63% identity) | Pga1313ORF24560P | |
| 24545 | IS1380 family transposase | |||
| 24550 | PIN domain-containing protein | |||
| 24555 | 85 aa hypothetical protein | |||
| 24560 | M | M.Cep9333ORF1099P (85% identity) | M.Pga1313ORF24560P | |
| 24565 | DNA binding domain-containing protein | |||
| 24570 | Uma2 family endonuclease | |||
| 24575 | type II toxin-antitoxin system | |||
| 24580 | Txe/YoeB family addiction module toxin | |||
| 24585 | S | S.Pps170ORF3729P (37% identity) | S1.Pga1313ORF24560P | |
| 24590 | IS4 family transposase | |||
| 24595 | S | S.EadM828ORFGP (17% identity) | S2.Pga1313ORF24560P | |
| 24600 | 97 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 105 | F0F1 ATP synthase subunit alpha | |||
| 110 | M | M.Cmi6605ORF1515P (71% identity) | M.Pga1313ORF110P | |
| 115 | R | Csp2100ORF29950P (80% identity) | Pga1313ORF110P | |
| 120 | ATP-binding protein | |||
| 595 | helix-turn-helix transcriptional regulator | |||
| 600 | R | TspQ5ORF8975P (52% identity) | Pga1313ORF605P | |
| 605 | M | M.Hsp7418ORF1436P (64% identity) | M.Pga1313ORF605P | |
| 610 | indole-3-glycerol phosphate synthase TrpC | |||
| 1045 | type II toxin-antitoxin system HicB family | |||
| 1050 | RM | Pag7811ORF3327P (43% identity) | Pga1313ORF1050P | |
| 1055 | 90 aa hypothetical protein | |||
| 1205 | VIT domain-containing protein | |||
| 1210 | M | M.AmaMORF2583P (74% identity) | M.Pga1313ORF1210P | |
| 1215 | R | AmaMORF2583P (77% identity) | Pga1313ORF1210P | |
| 1220 | phosphate ABC transporter substrate-binding | |||
| 5965 | M1 family metallopeptidase | |||
| 5970 | M | M.Psp1811ORFCP (66% identity) | M.Pga1313ORF5970P | |
| 5975 | ABC transporter permease | |||
| 6855 | sensor histidine kinase | |||
| 6860 | R | Ask12713ORF345P (41% identity) | Pga1313ORF6865P | |
| 6865 | M | M.BpiWesBORF2404P (57% identity) | M.Pga1313ORF6865P | |
| 6870 | DUF3685 domain-containing protein | |||
| 8955 | transposase | |||
| 8960 | RM | Wna131ORF21105P (54% identity) | Pga1313ORF8960P | |
| 8965 | transposase | |||
| 9365 | SDR family NAD(P)-dependent oxidoreductase | |||
| 9370 | RM | Tbo703ORF12190P (64% identity) | Pga1313ORF9370P | |
| 9375 | 52 aa hypothetical protein | |||
| 10025 | tetratricopeptide repeat protein | |||
| 10030 | RM | Psp1811ORFJP (53% identity) | Pga1313ORF10030P | |
| 10035 | 73 aa hypothetical protein | |||
| 11685 | excinuclease ABC subunit UvrA | |||
| 11690 | RM | Dsp315AORF612P (64% identity) | Pga1313ORF11690P | |
| 11695 | 735 aa hypothetical protein | |||
| 12615 | HNH endonuclease signature motif containing | |||
| 12620 | M | M.Psp1811ORFGP (90% identity) | M.Pga1313ORF12620P | |
| 12625 | PIN domain-containing protein | |||
| 15120 | type II toxin-antitoxin system RelE/ParE family | |||
| 15125 | RM | Ssp7502ORF646P (79% identity) | Pga1313ORF15125P | |
| 15130 | glycosyltransferase family 1 protein | |||
| 18350 | PAS domain S-box protein | |||
| 18355 | R | Pmu1806ORFUP (93% identity) | Pga1313ORF18370P | |
| 18360 | Uma2 family endonuclease | |||
| 18365 | 82 aa hypothetical protein | |||
| 18370 | M | M.Pmu1806ORFUP (74% identity) | M.Pga1313ORF18370P | |
| 18375 | 95 aa hypothetical protein | |||
| 20990 | energy-coupling factor transporter transmembrane | |||
| 20995 | M | M.Nsp0039ORF2154P (71% identity) | M.Pga1313ORF20995P | |
| 21000 | R | Nsp7107ORF3371P (80% identity) | Pga1313ORF20995P | |
| 21005 | energy-coupling factor transporter ATPase | |||
| 21130 | ribonucleoside-triphosphate reductase, | |||
| 21135 | RM | Kra44963ORF86P (55% identity) | Pga1313ORF21135P | |
| 21140 | pyridoxamine 5-phosphate oxidase family | |||
| 21445 | DUF1778 domain-containing protein | |||
| 21450 | M | M.Dhe447ORF16765P (78% identity) | M.Pga1313ORF21450P | |
| 21455 | R | Nsp9414ORF34170P (81% identity) | Pga1313ORF21450P | |
| 21460 | 202 aa hypothetical protein | |||
| 21905 | 189 aa hypothetical protein | |||
| 21910 | M | M.PyaNHR1ORF7075P (94% identity) | M.Pga1313ORF21910P | |
| 21915 | R | PspRG53ORF235P (93% identity) | Pga1313ORF21910P | |
| 21920 | geranylgeranyl reductase family protein | |||
| plasmid pPg_01 | ||||
| 23345 | DISARM system SNF2-like helicase DrmD | |||
| 23350 | RM | Pmu1806ORFFP (70% identity) | Pga1313ORF23350P | |
| 23355 | 79 aa hypothetical protein | |||
| plasmid pPg_02 | ||||
| 24330 | Uma2 family endonuclease | |||
| 24335 | RM | Ava23ORF60880P (43% identity) | Pga1313ORF24335P | |
| 24340 | DUF29 domain-containing protein | |||
| plasmid pPg_03 | ||||
| 25365 | 90 aa hypothetical protein | |||
| 25370 | RM | NpuORF91P (52% identity) | Pga1313ORF25370P | |
| 25375 | helicase-related protein | |||
| plasmid pPg_04 | ||||
| 25950 | DUF6527 family protein | |||
| 25955 | R | LboCZ1ORF5910P (68% identity) | Pga1313ORF25965P | |
| 25960 | 207 aa hypothetical protein | |||
| 25965 | M | M.Lsp174ORF4225P (63% identity) | M.Pga1313ORF25965P | |
| 25970 | ribbon-helix-helix domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8495 | helix-turn-helix domain-containing protein | |||
| 8500 | R | Rth16684ORF3058P (66% identity) | Pga1313ORF8505P | |
| 8505 | M | M.PbaMalM25ORF33040P (58% identity) | M.Pga1313ORF8505P | |
| 8510 | 456 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10415 | SPFH domain-containing protein | |||
| 10420 | R | PspRG53McrCP (83% identity) | Pga1313McrCP | |
| 10425 | 208 aa hypothetical protein | |||
| 10430 | PIN domain-containing protein | |||
| 10435 | transposase family protein | |||
| 10440 | 48 aa hypothetical protein | |||
| 10445 | 77 aa hypothetical protein | |||
| 10450 | R | Fnu066McrBP (17% identity) | Pga1313McrBP | |
| 10455 | NAD(+) kinase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13690 | 139 aa hypothetical protein | |||
| 13695 | M | M.Psp1811ORFEP (74% identity) | M.Pga1313ORF13695P | |
| 13700 | 2-phosphosulfolactate phosphatase family | |||