Phytobacter diazotrophicus TA9832 |
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Putative Phytobacter diazotrophicus TA9832 RM systems
Ref: Kubota,H. et al. unpublished
REBASE ref # 33665
| Sequence length: | GenBank #: | |
| Chromosome: | 5,675,557 bp | AP028050 |
| plasmid pTMTA98321: | 174,856 bp | AP028051 |
| plasmid pTMTA98322: | 174,343 bp | AP028052 |
REBASE acronym: Pdi9832
Org_num: 67061
All begin PDTA9832_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4080 | cell division protein DamX | |||
| 4090 | M | M.PspSCO41DamP (100% identity) | GATC | M.Pdi9832DamP |
| 4100 | ribulose-phosphate 3-epimerase | |||
| 11280 | LysR family transcriptional regulator | |||
| 11290 | M | M.PspSCO41ORFAP (100% identity) | CCWGG | M.Pdi9832ORF11290P |
| 11300 | 213 aa hypothetical protein | |||
| 11430 | TraR/DksA family transcriptional regulator | |||
| 11440 | M | M.Pdi9759ORF11450P (100% identity) | M.Pdi9832ORF11440P | |
| 11450 | replication endonuclease | |||
| 18420 | 86 aa hypothetical protein | |||
| 18430 | M | M.Pdi9759ORF18460P (100% identity) | M.Pdi9832ORF18430P | |
| 18440 | S49 family peptidase | |||
| 32940 | 55 aa hypothetical protein | |||
| 32950 | M | M.Pdi9759ORF33280P (100% identity) | M.Pdi9832ORF32950P | |
| 32960 | 86 aa hypothetical protein | |||
| 32960 | 86 aa hypothetical protein | |||
| 32970 | M | M.Pdi9759ORF33300P (100% identity) | M.Pdi9832ORF32970P | |
| 32980 | 162 aa hypothetical protein | |||
| 46980 | TonB-dependent siderophore receptor | |||
| 46990 | RM | Pdi9759ORF47340P (100% identity) | Pdi9832ORF47000P | |
| 47000 | M | M.Pdi9759ORF47340P (100% identity) | M.Pdi9832ORF47000P | |
| 47010 | 31 aa hypothetical protein | |||
| plasmid pTMTA98321 | ||||
| 54560 | IS110 family transposase | |||
| 54570 | R | Pdi9759ORF56980P (100% identity) | Pdi9832ORF54580P | |
| 54580 | M | M.Pdi9759ORF56980P (100% identity) | M.Pdi9832ORF54580P | |
| 54590 | DNA methylase | |||
| 54580 | DNA cytosine methyltransferase | |||
| 54590 | M | M.Pdi9759ORF56990P (100% identity) | M.Pdi9832ORF54590P | |
| 54600 | 73 aa hypothetical protein | |||
| plasmid pTMTA98322 | ||||
| 57170 | 100 aa hypothetical protein | |||
| 57180 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Pdi9832ORF57180P |
| 57190 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40030 | diguanylate cyclase | |||
| 40040 | R | Pdi9759McrBP (100% identity) | Pdi9832McrBP | |
| 40050 | R | Pdi9759McrCP (100% identity) | Pdi9832McrCP | |
| 40060 | MFS transporter | |||