Phytobacter diazotrophicus TA9730 |
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Putative Phytobacter diazotrophicus TA9730 RM systems
Ref: Kubota,H. et al. unpublished
REBASE ref # 33665
| Sequence length: | GenBank #: | |
| Chromosome: | 5,610,297 bp | AP028041 |
| plasmid pTMTA97301: | 175,916 bp | AP028042 |
| plasmid pTMTA97302: | 172,011 bp | AP028043 |
REBASE acronym: Pdi9730
Org_num: 67059
All begin PDTA9730_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4080 | cell division protein DamX | |||
| 4090 | M | M.PspSCO41DamP (100% identity) | GATC | M.Pdi9730DamP |
| 4100 | ribulose-phosphate 3-epimerase | |||
| 11280 | LysR family transcriptional regulator | |||
| 11290 | M | M.PspSCO41ORFAP (100% identity) | CCWGG | M.Pdi9730ORF11290P |
| 11300 | 213 aa hypothetical protein | |||
| 11430 | TraR/DksA family transcriptional regulator | |||
| 11440 | M | M.Pdi9832ORF11440P (100% identity) | M.Pdi9730ORF11440P | |
| 11450 | replication endonuclease | |||
| 18420 | 86 aa hypothetical protein | |||
| 18430 | M | M.Pdi9832ORF18430P (100% identity) | M.Pdi9730ORF18430P | |
| 18440 | S49 family peptidase | |||
| 32290 | 55 aa hypothetical protein | |||
| 32300 | M | M.Pdi9832ORF32950P (100% identity) | M.Pdi9730ORF32300P | |
| 32310 | 86 aa hypothetical protein | |||
| 32310 | 86 aa hypothetical protein | |||
| 32320 | M | M.Pdi9832ORF32970P (100% identity) | M.Pdi9730ORF32320P | |
| 32330 | 162 aa hypothetical protein | |||
| 46330 | TonB-dependent siderophore receptor | |||
| 46340 | RM | Pdi9832ORF47000P (100% identity) | Pdi9730ORF46350P | |
| 46350 | M | M.Pdi9832ORF47000P (100% identity) | M.Pdi9730ORF46350P | |
| 46360 | 31 aa hypothetical protein | |||
| plasmid pTMTA97301 | ||||
| 53950 | IS110 family transposase | |||
| 53960 | R | Pdi9832ORF54580P (100% identity) | Pdi9730ORF53970P | |
| 53970 | M | M.Pdi9832ORF54580P (100% identity) | M.Pdi9730ORF53970P | |
| 53980 | DNA methylase | |||
| 53970 | DNA cytosine methyltransferase | |||
| 53980 | M | M.Pdi9832ORF54590P (100% identity) | M.Pdi9730ORF53980P | |
| 53990 | 73 aa hypothetical protein | |||
| plasmid pTMTA97302 | ||||
| 56510 | 100 aa hypothetical protein | |||
| 56520 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Pdi9730ORF56520P |
| 56530 | 143 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39380 | diguanylate cyclase | |||
| 39390 | R | Pdi9832McrBP (100% identity) | Pdi9730McrBP | |
| 39400 | R | Pdi9832McrCP (100% identity) | Pdi9730McrCP | |
| 39410 | MFS transporter | |||