Escherichia coli 4A_CSF1O9 |
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Putative Escherichia coli 4A_CSF1O9 RM systems
Ref: Taskeen,S. and Singh,R. unpublished
REBASE ref # 36594
Complete sequence: 4,641,776 bp
GenBank #: CP123272
REBASE acronym: Eco4ACSF109
Org_num: 66710
All begin P8731_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22340 | endoribonuclease SymE | |||
| 22345 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco4ACSF109ORF22350P |
| 22350 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco4ACSF109ORF22350P |
| 22355 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco4ACSF109ORF22350P |
| 22360 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10160 | drug/metabolite exporter YedA | |||
| 10165 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco4ACSF109DcmP |
| 10170 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco4ACSF109DcmP |
| 10175 | phosphohydrolase | |||
| 16740 | DNA-binding transcriptional regulator Fis | |||
| 16745 | M | M.EcoSTEC416ORF26670P (100% identity) | ATGCAT | M.Eco4ACSF109ORF16745P |
| 16750 | DUF2556 family protein | |||
| 17365 | ribulose-phosphate 3-epimerase | |||
| 17370 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4ACSF109DamP |
| 17375 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5945 | recombinase family protein | |||
| 5950 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco4ACSF109ORF5950P |
| 5955 | isocitrate/isopropylmalate family dehydrogenase | |||
| 22355 | type I restriction-modification system | |||
| 22360 | R | SenHNK130MrrP (100% identity) | Eco4ACSF109MrrP | |
| 22365 | GTPase | |||