Rhizobium tumorigenes 1078 |
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Putative Rhizobium tumorigenes 1078 RM systems
Ref: Kuzmanovi,N. et al. Sci Rep 8 (1), 9051 (2018)
REBASE ref # 36620
| Sequence length: | GenBank #: | |
| Chromosome: | 3,664,408 bp | CP117255 |
| plasmid pTi1078: | 439,071 bp | CP117257 |
REBASE acronym: Rtu1078
Org_num: 66794
All begin PR017_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 670 | YihY/virulence factor BrkB family protein | |||
| 675 | M | M.Sme225CORF1658P (78% identity) | M.Rtu1078ORF675P | |
| 680 | 216 aa hypothetical protein | |||
| plasmid pTi1078 | ||||
| 21735 | R | Rtu932ORF22215P (100% identity) | Rtu1078ORF21745P | |
| 21740 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| 21745 | M | M.Rtu932ORF22215P (100% identity) | M.Rtu1078ORF21745P | |
| 21750 | V | V.Rtu932ORF22215P (100% identity) | V.Rtu1078ORF21745P | |
| 21755 | 449 aa hypothetical protein | |||
| 23570 | IS701 family transposase | |||
| 23575 | R | Rtu932ORF24025P (100% identity) | Rtu1078ORF23580P | |
| 23580 | M | M.Rtu932ORF24025P (100% identity) | M.Rtu1078ORF23580P | |
| 23585 | DUF4365 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2565 | nucleotidyltransferase family protein | |||
| 2570 | M | M.Rtu932ORF2435P (100% identity) | M.Rtu1078ORF2570P | |
| 2575 | nuclear transport factor 2 family protein | |||