Edwardsiella tarda SC002 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Edwardsiella tarda SC002 RM systems
Ref: Rehman,M.N.U. et al. Front Vet Sci 10, 1140655 (2023)
REBASE ref # 36535
| Sequence length: | GenBank #: | |
| Chromosome: | 3,662,469 bp | CP116675 |
| plasmid pEtSC002-1: | 114,035 bp | CP116676 |
| plasmid pEtSC002-4: | 65,767 bp | CP116679 |
REBASE acronym: EtaSC002
Org_num: 66393
All begin PHA77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2145 | 92 aa hypothetical protein | |||
| 2150 | R | Epi351ORFBP (96% identity) | EtaSC002ORF2160P | |
| 2155 | S | S.Eho173ORFAP (63% identity) | S.EtaSC002ORF2160P | |
| 2160 | M | M.Eta9887ORF1960P (98% identity) | M.EtaSC002ORF2160P | |
| 2165 | AAA domain-containing protein | |||
| plasmid pEtSC002-1 | ||||
| 17260 | ISL3-like element ISKpn25 family transposase | |||
| 17265 | R | Kpns9645IP (99% identity) | EtaSC002ORF17275P | |
| 17270 | S | S.KvaGJ3ORF27635P (96% identity) | S.EtaSC002ORF17275P | |
| 17275 | M | M.KpnCH55ORF19745P (99% identity) | M.EtaSC002ORF17275P | |
| 17280 | arsenite efflux transporter ATPase subunit ArsA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1045 | SPOR domain-containing protein | |||
| 1050 | M | M.EtaC53DamP (100% identity) | GATC | M.EtaSC002DamP |
| 1055 | ribulose-phosphate 3-epimerase | |||
| 11215 | 82 aa hypothetical protein | |||
| 11220 | M | M.Kpn160III (94% identity) | M.EtaSC002ORF11220P | |
| 11225 | 317 aa hypothetical protein | |||
| 11230 | DUF3696 domain-containing protein | |||
| 11235 | R | Pba111ORF21080P (87% identity) | EtaSC002ORF11220P | |
| 11240 | 307 aa hypothetical protein | |||
| plasmid pEtSC002-4 | ||||
| 19135 | ParA family plasmid-partitioning AAA ATPase | |||
| 19140 | M | M.EtaHB1ORF17285P (96% identity) | M.EtaSC002ORF19140P | |
| 19145 | DUF1380 family protein | |||