Pseudodesulfovibrio species MCM B-1480 |
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Putative Pseudodesulfovibrio species MCM B-1480 RM systems
Ref: Gaikwad,S.L. et al. unpublished
REBASE ref # 36612
Complete sequence: 3,887,578 bp
GenBank #: CP120635
REBASE acronym: Psp1480
Org_num: 66771
All begin LF599_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2585 | 128 aa hypothetical protein | |||
| 2590 | M | M.Psp5S69ORF5710P (94% identity) | M.Psp1480ORF2590P | |
| 2595 | S | S.Psp5S69ORF5710P (53% identity) | S.Psp1480ORF2590P | |
| 2600 | 146 aa hypothetical protein | |||
| 2605 | 73 aa hypothetical protein | |||
| 2610 | R | Psp5S69ORF5710P (97% identity) | Psp1480ORF2590P | |
| 2615 | ISL3 family transposase | |||
| 8910 | HTH domain-containing protein | |||
| 8915 | R | DdeGORF1861P (98% identity) | Psp1480ORF8930P | |
| 8920 | S | S1.Dol6ORF7365P (82% identity) | S2.Psp1480ORF8930P | |
| 8925 | S | S.Mho15978ORF633P (38% identity) | S1.Psp1480ORF8930P | |
| 8930 | M | M.GspM18ORF2924P (96% identity) | M.Psp1480ORF8930P | |
| 8935 | helix-turn-helix domain-containing protein | |||
| 16750 | site-specific DNA-methyltransferase | |||
| 16755 | S | S3.NreHR1aORF30070P (38% identity) | S3.Psp1480ORF16795P | |
| 16760 | R | DspOc1ORF1772P (97% identity) | Psp1480ORF16795P | |
| 16765 | toll/interleukin-1 receptor domain-containing | |||
| 16770 | 104 aa hypothetical protein | |||
| 16775 | DUF2188 domain-containing protein | |||
| 16780 | HAD family hydrolase | |||
| 16785 | S | S.DspJ2ORF3425P (61% identity) | S2.Psp1480ORF16795P | |
| 16790 | DNA damage-inducible protein D | |||
| 16795 | M | M.Ppo14722ORF17170P (98% identity) | M.Psp1480ORF16795P | |
| 16800 | S | S2.Dde132ORFCP (75% identity) | S1.Psp1480ORF16795P | |
| 16805 | 238 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4315 | IS3 family transposase | |||
| 4320 | M | M.DdeL4DndCP (62% identity) | M.Psp1480DndCP | |
| 4325 | 75 aa hypothetical protein | |||
| 4325 | 75 aa hypothetical protein | |||
| 4330 | M | M.DdeL4DndDP (57% identity) | M.Psp1480DndDP | |
| 4335 | DndE family protein | |||
| 4330 | AAA family ATPase | |||
| 4335 | M | M.DdeL4DndEP (57% identity) | M.Psp1480DndEP | |
| 4340 | RHS repeat-associated core domain-containing | |||
| 7440 | 174 aa hypothetical protein | |||
| 7445 | M | M.Gsp8ORF19210P (61% identity) | M.Psp1480ORF7445P | |
| 7450 | R | DdeL4ORF270P (47% identity) | Psp1480ORF7445P | |
| 7455 | 194 aa hypothetical protein | |||
| 9115 | 120 aa hypothetical protein | |||
| 9120 | M | M.DteS28bFORFJP (98% identity) | M.Psp1480ORF9120P | |
| 9125 | helix-turn-helix domain-containing protein | |||
| 9125 | helix-turn-helix domain-containing protein | |||
| 9130 | M | M2.Psp5S69ORF11770P (100% identity) | CTGCAG | M.Psp1480ORF9130P |
| 9135 | R | Psp5S69ORF11770P (100% identity) | CTGCAG | Psp1480ORF9130P |
| 9140 | minor capsid protein | |||
| 13555 | 120 aa hypothetical protein | |||
| 13560 | M | M1.Psp5S69ORF11770P (99% identity) | M.Psp1480ORF13560P | |
| 13565 | helix-turn-helix domain-containing protein | |||
| 13565 | helix-turn-helix domain-containing protein | |||
| 13570 | M | M2.Psp5S69ORF11770P (100% identity) | CTGCAG | M.Psp1480ORF13570P |
| 13575 | R | Psp5S69ORF11770P (100% identity) | CTGCAG | Psp1480ORF13570P |
| 13580 | minor capsid protein | |||
| 14535 | response regulator receiver domain | |||
| 14540 | R | Bsp53351ORF22580P (43% identity) | Psp1480ORF14545P | |
| 14545 | M | M.DvuRCH1ORF1552P (65% identity) | M.Psp1480ORF14545P | |
| 14550 | V | V.Dme12FAKORFAP (46% identity) | V.Psp1480ORF14545P | |
| 14560 | IS110 family transposase | |||
| 16745 | helix-turn-helix transcriptional regulator | |||
| 16750 | M | M.DspOc1ORF1765P (98% identity) | M.Psp1480ORF16750P | |
| 16755 | SprT family zinc-dependent metalloprotease | |||
| 16900 | 278 aa hypothetical protein | |||
| 16905 | M | M.Nsi3584ORFCP (42% identity) | M.Psp1480ORF16905P | |
| 16910 | 222 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8905 | glyceraldehyde 3-phosphate dehydrogenase | |||
| 8910 | R | DteS28bFMrrP (92% identity) | Psp1480MrrP | |
| 8915 | type I restriction endonuclease subunit R | |||