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Putative Helicobacter species NHP21005 NHP21-005 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 36568
Sequence length: | GenBank #: | |
Chromosome: | 1,737,144 bp | AP028022 |
plasmid pNHP21005_2: | 24,904 bp | AP028024 |
REBASE acronym: Hsp21005
Org_num: 66630
All begin NHP21005_, NHP21005_r, NHP21005_tm
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9370 | HicB-like domain-containing protein | |||
9380 | S | S.Hsp5293ORF10015P (47% identity) | S2.Hsp21005ORF9420P | |
9390 | R | HbiCORF350P (58% identity) | Hsp21005ORF9420P | |
9400 | S | S2.Fpr3ORF30950P (19% identity) | S1.Hsp21005ORF9420P | |
9410 | 257 aa hypothetical protein | |||
9420 | M | M.HbiCORF380P (69% identity) | M.Hsp21005ORF9420P | |
9430 | 66 aa hypothetical protein | |||
9920 | 84 aa hypothetical protein | |||
??? | R | HfeORF15930P (80% identity) | Hsp21005ORF9970P | |
9950 | S | S.HaiASB7ORF6350P (55% identity) | S2.Hsp21005ORF9970P | |
9960 | S | S2.MauBONORF2546P (20% identity) | S1.Hsp21005ORF9970P | |
??? | M | M.HaiASB7ORF4510P (84% identity) | M.Hsp21005ORF9970P | |
9990 | 45 aa hypothetical protein | |||
10440 | 55 aa hypothetical protein | |||
10450 | S | S.HpyML2ORFMP (62% identity) | S.Hsp21005ORF10460P | |
10460 | M | M.HpySP110ORF2320P (56% identity) | M.Hsp21005ORF10460P | |
??? | R | HpyU102ORF2135P (32% identity) | Hsp21005ORF10460P | |
10490 | 74 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
500 | 80 aa hypothetical protein | |||
510 | M | M.Hsp0003ORF470P (84% identity) | M.Hsp21005ORF510P | |
520 | Shikimate 5-dehydrogenase | |||
1860 | 128 aa hypothetical protein | |||
1870 | RM | Hsp0003ORF4950P (66% identity) | Hsp21005ORF1870P | |
1880 | 50 aa hypothetical protein | |||
11250 | 565 aa hypothetical protein | |||
??? | M | M.Hsp21005ORF16020P (71% identity) | M.Hsp21005ORF11260P | |
10 | 499 aa hypothetical protein | |||
11290 | 122 aa hypothetical protein | |||
??? | RM | HfeORF12890P (59% identity) | Hsp21005ORF11300P | |
11330 | Quinone-reactive Ni/Fe hydrogenase HydA | |||
12630 | Molybdenum cofactor biosynthesis protein A MoaA | |||
12640 | M | M.Hsp0003ORF8710P (72% identity) | M.Hsp21005ORF12640P | |
12660 | Type II restriction enzyme | |||
12650 | 72 aa hypothetical protein | |||
12660 | R | Hsp0012ORF10580P (87% identity) | Hsp21005ORF12670P | |
12670 | M | M.Hsp0003ORF8740P (90% identity) | M.Hsp21005ORF12670P | |
12680 | 73 aa hypothetical protein | |||
14840 | Saccharopine dehydrogenase | |||
??? | M | M.Hsp0003ORF5180P (85% identity) | M.Hsp21005ORF14850P | |
14870 | 660 aa hypothetical protein | |||
16010 | Hemolysin Tly | |||
??? | M | M.Hsp0003ORF12800P (80% identity) | M.Hsp21005ORF16020P | |
16040 | 54 aa hypothetical protein | |||
18580 | Histidyl-tRNA synthetase HisS | |||
??? | M | M.Hsp0003ORF15120P (77% identity) | M.Hsp21005ORF18590P | |
10 | pseudogene | |||
plasmid pNHP21005_2 | ||||
19750 | 864 aa hypothetical protein | |||
19760 | M | M.HbiCORF700P (93% identity) | M.Hsp21005ORF19760P | |
19770 | R | HbiCORF700P (86% identity) | Hsp21005ORF19760P | |
19780 | HipA domain-containing protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
13800 | 95 aa hypothetical protein | |||
13810 | R | HbiCORF1950P (17% identity) | Hsp21005ORF13820P | |
??? | M | M.Csp25113ORF1146P (22% identity) | M.Hsp21005ORF13820P | |
13840 | Carbamoyl phosphate synthase large subunit CarB | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
10290 | 120 aa hypothetical protein | |||
10300 | R | Hsp6242McrBP (24% identity) | Hsp21005McrB2P | |
10310 | R | HbiCMcrC2P (69% identity) | Hsp21005McrC2P | |
10320 | 125 aa hypothetical protein |